Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1974 ATGGGATCAGAGAGTGTGGCTCCGGCTGTTGAGACATCAAAAAGCAGGTCTTCTTCTGGTAAAATGAACCAAGGGAAAGTCCCCAGGAAAATTCACAAGGCTGAAAGGGAGAAAATGAAACGTGAACATTTGAATGAACTCTTTCTTGATCTTGCCAGTGCACTTGACGTAAATGAGAACAATGGAAAGGCTTCTATATTGTGTGAAGCTTCTAGGTTGCTAAAAGACTTGCTCTCTCAGATCGAGTCCCTCAAGAAAGAGAACGTCACACTCTTGTCTGAATCGCATTATGTGACTATGGAGAAAAATGAGCTGAAGGAGGAGAATTGTAGCCTAGAAACTCAAATTGAGAAACTTCAAGGAGAGATACAGGCAAGAGTTGCTCAATCTAAACCAGACCTGAATGTACCACATTCGGAACTTGAGCCACTGGAGCAGTCAAATTTTCTAGGACAGAGTGTCCAATTGCCTACCATGGAACCTAACTTGCAGCAAGGATCTGCAGTTTTGCTTGTCCCTTTTCGTCCTGATCTTCAAGCTTCTTTTCCAGCTCCTAATGTTAACGAAGTCGCGCCAAATTCTACTTCTGTTGTCAGTAAACCGCATGCTAGGTATCCCACAGCAGCAGATTCATGGCCATCACAGCTGCTTGGATAG 657 0.4384 MGSESVAPAVETSKSRSSSGKMNQGKVPRKIHKAEREKMKREHLNELFLDLASALDVNENNGKASILCEASRLLKDLLSQIESLKKENVTLLSESHYVTMEKNELKEENCSLETQIEKLQGEIQARVAQSKPDLNVPHSELEPLEQSNFLGQSVQLPTMEPNLQQGSAVLLVPFRPDLQASFPAPNVNEVAPNSTSVVSKPHARYPTAADSWPSQLLG* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1974 218 MobiDBLite consensus disorder prediction 1 24 - -
Pvu3g1974 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 28 77 IPR011598 GO:0046983
Pvu3g1974 218 Coils Coil 102 122 - -
Pvu3g1974 218 PANTHER TRANSCRIPTION FACTOR BHLH47 4 217 - -
Pvu3g1974 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 29 104 IPR036638 GO:0046983
Pvu3g1974 218 MobiDBLite consensus disorder prediction 1 37 - -
Pvu3g1974 218 Coils Coil 74 94 - -
Pvu3g1974 218 Gene3D - 20 94 IPR036638 GO:0046983
Pvu3g1974 218 MobiDBLite consensus disorder prediction 192 218 - -
Pvu3g1974 218 PANTHER TRANSCRIPTION FACTOR BHLH47 4 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1974 Pvu-Chr3 40329724 40332386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1974 21 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 50.917 1.17e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1974 - - vun:114176257 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1974 3 40329724 40332386 Pvu3g1974 3 40329724 40332386 ECH