Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1947 ATGGATGCTGAAACTGAGACCGAGGAACTTATTAATTTGAACAATAAAGCAAGTAACTGTGGTGGGAATAATAGTAAGAGTGGCGATGGCTTTATTGACAGAAGCAAAGTGAGGATTTTGTTGTGTGACAACGATTCCAAGAGTTCTGAAGAGGTTTTTACTCTTCTTCTGGGGTGTTCTTATCAGGTAACTTCAGTAAGATCAGCTAGGCAACTAATTGATGCACTGAATGCGGAAAGGCAATATATAGACATGATACTAGTTGAAGTTGACCTTCCGGTAAAGAAAGGAATGAAGTTGTTGAAGTACATAACAAGGGATAAAGAATTATGCCGAATCCCTGTTATAATGATGTCTGCACAAGATGAGATATCCGTTGTTGTAAAGTGTTTGAGGCTTGGAGCAGCAGATTACCTAGTGAAGCCTTTACGCACAAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGACGCATGCTTGGCGTTGTGGAGAACAACATCTTGAACTATGAGTTTGAACTGGTAGCATCAGATCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAGGCACTAATCCAGAGACAGGAGTATCAGTCCAACAAGAACAAGAGGTTAGTATTGCCGCTGCCGCCAGTATTGCGATGGAGCTTCCCAGTGCTCTTGTATCAGAATATCAGCCTGATGTGCCTGGAATAAGTGATCGCCGAACAGGACATTTTTCAACTGGTCCAAAGAAGAGTGAACTGAAGATTGGAGAGTCATCAGCCTTTTTCACCTATGTCAAAGCAACAGCACTGAAGAGCAACATTGAAGAGAGTGCTCATGTTGACAATACTACTACAGAAGTTAGGGTGGAACATGTGAATCAAGCATGTGGTGAACAGGAGGGTAATGACCTTAAAACACATGAAAATGGAGAAATGTTTGAAAATCATTCACAAGATGACTTACCCAGCAGCAACAGTATCCCTGATTCTTTCTCTATTGAGAGATCTTGTACTCCACCTGCTTCGATGGAAGTTTCTCAGCAAAAGCATTACAGGGAAGAACATTCTCAAGGAGTAGTGCATCCAAGAAATGGAAGTCATGGTTCCGATCCTGCTCAACATGTTTATCCATATTATATTTCAGGAGCTGTTAATCATGTTATGTTATCATCAGCACAAATATATCAAAAGAATATCCAGGACCTCCAAAGTCATTCTAGTTCATCTGTGATTGCACAGTACAATCATCTTCCCCAGTGTCCTCCTCATGCAAGTGGGATGACACCCTTCCCATATTATCCAATGAACATTTACTTACAACCTGGTCAGATTTCTACAACTCATTCTTGGCCATCATTAGGAAGTTCAAGCTCATGTGAAGTAAAATTAAGTAAGGTTGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGAAAAGAACGCTGTTTTGAGAAGAAAATTAGGTATGTCAACAGAAAACGGCTGGCAGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCCGAAAGTTGAATGGTGTTAATGTGGATCTTAATGGACAACCTACTTCTACTGATTATGATGAAGAAGATGATGAAGAGGAGGAAGACAACCATGTAGCAAGAGATTTCTCTCCTGAGGATGCTTGA 1680 0.4089 MDAETETEELINLNNKASNCGGNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVTSVRSARQLIDALNAERQYIDMILVEVDLPVKKGMKLLKYITRDKELCRIPVIMMSAQDEISVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGVVENNILNYEFELVASDPSDANTNSTTLFSDDTDDKSKRGTNPETGVSVQQEQEVSIAAAASIAMELPSALVSEYQPDVPGISDRRTGHFSTGPKKSELKIGESSAFFTYVKATALKSNIEESAHVDNTTTEVRVEHVNQACGEQEGNDLKTHENGEMFENHSQDDLPSSNSIPDSFSIERSCTPPASMEVSQQKHYREEHSQGVVHPRNGSHGSDPAQHVYPYYISGAVNHVMLSSAQIYQKNIQDLQSHSSSSVIAQYNHLPQCPPHASGMTPFPYYPMNIYLQPGQISTTHSWPSLGSSSSCEVKLSKVDRREAALMKFRQKRKERCFEKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPTSTDYDEEDDEEEEDNHVARDFSPEDA* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1947 559 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 542 IPR045279 GO:0009736
Pvu3g1947 559 MobiDBLite consensus disorder prediction 523 559 - -
Pvu3g1947 559 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 2 542 - -
Pvu3g1947 559 ProSiteProfiles Response regulatory domain profile. 38 156 IPR001789 GO:0000160
Pvu3g1947 559 MobiDBLite consensus disorder prediction 534 548 - -
Pvu3g1947 559 ProSiteProfiles CCT domain profile. 478 520 IPR010402 GO:0005515
Pvu3g1947 559 SUPERFAMILY CheY-like 35 163 IPR011006 -
Pvu3g1947 559 Pfam CCT motif 478 520 IPR010402 GO:0005515
Pvu3g1947 559 Pfam Response regulator receiver domain 39 150 IPR001789 GO:0000160
Pvu3g1947 559 MobiDBLite consensus disorder prediction 185 214 - -
Pvu3g1947 559 Gene3D - 37 239 - -
Pvu3g1947 559 SMART REC_2 37 152 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1947 Pvu-Chr3 40066093 40072275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1947 26 558 Response Regulator Gene Family AT5G61380 49.761 4.98e-179 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pvu3g1947 Response_reg 1.5e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1947 K12127 - gmx:100786522 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1947 3 40066093 40072275 Pvu3g1947 3 40066093 40072275 ECH