Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1943 ATGGGCCTAGACAACAAAGGAATCAGACTCATATTCATTTTCGTTCTTCACCCTTTCCTTTTCACCCTCCCCAAATGCAACTCTTCTTTCACACCTCTGGTTAACTATCTCCTTGATTGTGGCTCCTCCCACCCCACTCAGCTCACAGATGGAAGAACTTTCAAATCTGATCGTGAAACCACTTCTCTCCTAGCCACAGCTGAAGATGTGCAAATATCACTTGACTCAAATCTCTCATCTTCTGTTCCTTCTTCATTACTTCCTTTGTATCAAACTGCAAGGCTTTTTCAAGAGGAATCCACCTACTCCTTTTACATATCTAAAACTGGTAGACTTTGGGTTCGCCTTTACTTCTTCCCTCTCTCTAACCCTTCATATAACCTAACAGCTGCTGTTTTCTCTGTCCAAACTAATCACCATGTGCTCCTGCATGAGTTCTCCGTGAGGAACAGTGACTCACCTGTTTTCAAGGAATACCTTGTTAACGTTTCTGATAGTAGATTCTCCCTCAAATTCAAGCCCATGAAAAACTCCTTTGCGTTCATCAATGCAATTGAGGTTGTCTCAGCCCCTGACAATCTTATTTCGGATTCAGCAATTGCACTTTCCCCACTTCGTGAATTCAAAGGCTTGTTGTTATCTGCTTTTGAAGTATCCTACAGAATAAACGTTGGTGGTCCCACCATAACTCCTGGCGACGACGCTTTGGCAAGAACATGGGAAACCGATGGTTCATACAACATCTTCCCACAGGGTTCTGAGACTCTTTCTGTCTCCAAAAAAAGCATAAAGTATCCTCATACTGGGGTTACACCTTTGATTGCTCCCAACTTGGTTTATGCAAGTGTTGTACACATGAAGGATGCTAAAGTCATGCGACCGAATTTCAATCTCAGTTGGATGGTGAACGTGGAAAGGAGCTACTCTTATTTGATAAGAATGCATTTCTGTGACATATTGAGCAAGAGTCTTAATCAGTTATACTTTAATGTGTACATCAACGGGATTGAGGGCGTGTCAGCTCTGAATCTATCATCGCAAACCAAAGCTCTAGCCACTGCTTTTTACCAGGACTTTGTGTTAAATGCACTGAATATAACAAACGGTTCCATTTTGGTTCAGGTGGGACCAACCAATCTCCAACAAGGCACGGTCGATGCAATTCTGAATGGAATTGAGGTGATGAAGATTAGCAACATCGCCGACAGCTTGGATGGTTTCTTCTCTGTTGATGGGAAATACAAAGGGCCAAGTTCAATAACCACGGAAATGAAAATTTTGGTTTATGTTGGACTTGTATTGGCTGTGACAGCAATGCTGTTGCTAGTAATGATTTGCATGAGGTGGAAAAAGAGGCCTCAAGGTTGGGAAAAGCATAGCAGATTCTCATCATGGCTCCTCCCTGTCCATTCACCTAGATTGTGTTCAAGCAAAAGCAGTTGGCGAGGCTCAACAGCATCCAGTTCCCACAAGAGCACTAAACATGGCAAAAGGTTCTTCCCCTTCAGTGAAATGCGAGAAGCCACCAATAATTTCGACGAGACTAGAGTGATTGGTGTTGGAGGCTTCGGGAAAGTGTATCTTGGAACGTTGAAAGATGGGACAAAGGTTGCCATAAAACGAGGAAGTGGTAATTCAGAACAAGGCATCAATGAGTTCAGAACAGAACTAGAAATGCTCTCAAAGCTACGCCATCGCCACCTTGTCTCATTGATGGGCTTCTGTGATGAAAACTCAGAGATGGTTCTTGTGTATGAGTACATGGCCAATGGCCCTTTTCGTTCCCACCTCTATGGCTTCGACCTCCCTTGTTTGTCATGGAAAAAGAGGCTTGAAATATGCATTGGTGCAGCTCGCGGCTTGCACTATCTCCACACCGGGGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATCCTCTTAGATGAGAACTACATTGCCAAGGTTTCTGACTTTGGTTTGTCAAAAGCTGTCCCAGAGAAAGCCCAAGTTAGCACAGCCGTAAAGGGTAGTTTCGGGTACCTTGACCCTGAGTACTATAGGAGTCAGCAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCCTATTTGAGGTACTATGTGCTAGGCCAGTTATTTGCCCAACACGTCCAACAGAAGAGATTAACTTGGCTGAATGGGCAAAGAAACAGCACAGAAGAGGAGTGCTCAATGAAGAAATTGATCCACATATTGCTGCTACTATGAATCTTCAATCGCAAAGTGTTTTTGTTCAAATTTCTGAGAGATGTTTAGCAGATTGTGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAATACGCTTTGCGCCTAGAAGAAGCTGCCTCACGGATTGATGAACCTGAAGATAAAAGTACAAGTATAGTCACAAATGAGGATAATTCTGTTTTGTTTTCTGAGATAGATAACTTAGAGGAAAGGTAA 2469 0.4322 MGLDNKGIRLIFIFVLHPFLFTLPKCNSSFTPLVNYLLDCGSSHPTQLTDGRTFKSDRETTSLLATAEDVQISLDSNLSSSVPSSLLPLYQTARLFQEESTYSFYISKTGRLWVRLYFFPLSNPSYNLTAAVFSVQTNHHVLLHEFSVRNSDSPVFKEYLVNVSDSRFSLKFKPMKNSFAFINAIEVVSAPDNLISDSAIALSPLREFKGLLLSAFEVSYRINVGGPTITPGDDALARTWETDGSYNIFPQGSETLSVSKKSIKYPHTGVTPLIAPNLVYASVVHMKDAKVMRPNFNLSWMVNVERSYSYLIRMHFCDILSKSLNQLYFNVYINGIEGVSALNLSSQTKALATAFYQDFVLNALNITNGSILVQVGPTNLQQGTVDAILNGIEVMKISNIADSLDGFFSVDGKYKGPSSITTEMKILVYVGLVLAVTAMLLLVMICMRWKKRPQGWEKHSRFSSWLLPVHSPRLCSSKSSWRGSTASSSHKSTKHGKRFFPFSEMREATNNFDETRVIGVGGFGKVYLGTLKDGTKVAIKRGSGNSEQGINEFRTELEMLSKLRHRHLVSLMGFCDENSEMVLVYEYMANGPFRSHLYGFDLPCLSWKKRLEICIGAARGLHYLHTGAAQSITHRDVKTTNILLDENYIAKVSDFGLSKAVPEKAQVSTAVKGSFGYLDPEYYRSQQLTQKSDIYSFGVVLFEVLCARPVICPTRPTEEINLAEWAKKQHRRGVLNEEIDPHIAATMNLQSQSVFVQISERCLADCGVDRPSMGDVLWHLEYALRLEEAASRIDEPEDKSTSIVTNEDNSVLFSEIDNLEER* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1943 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Pvu3g1943 822 Gene3D - 33 191 - -
Pvu3g1943 822 Gene3D - 215 399 - -
Pvu3g1943 822 Gene3D Phosphorylase Kinase; domain 1 474 587 - -
Pvu3g1943 822 SMART serkin_6 512 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1943 822 Pfam Malectin-like domain 38 397 IPR024788 -
Pvu3g1943 822 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 804 - -
Pvu3g1943 822 CDD STKc_IRAK 518 781 - -
Pvu3g1943 822 SUPERFAMILY Protein kinase-like (PK-like) 487 782 IPR011009 -
Pvu3g1943 822 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Pvu3g1943 822 PANTHER OS07G0166700 PROTEIN 20 804 IPR045272 GO:0004714|GO:0006468
Pvu3g1943 822 ProSiteProfiles Protein kinase domain profile. 512 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1943 822 Gene3D Transferase(Phosphotransferase) domain 1 588 809 - -
Pvu3g1943 822 Pfam Protein tyrosine and serine/threonine kinase 515 710 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1943 Pvu-Chr3 40044605 40047073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1943 25 801 Receptor kinase-like Gene Family AT5G61350 59.051 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu3g1943 Malectin_like 4.1e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1943 - - gmx:100814982 1277.31