Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1941 ATGTTTGGAGTACCACCTCCACCTCCCCCAATGTTTGGAGCACCACCTCCACCTCCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTCCCCCAATGTTTGGAGCACCACCTCCACCTCCACCTCCTGGTGGTAGAGGACCGCCCCCTCCACCTCCTCCTGGTGGCGGAGGTCCTCCTCCTCCACCTCCCCCAGGTGTTCCTGGTGCTCCTAGACCTCCGGGGGGTGGACCTCCACCACCTCCACCAAAAGGTGGAAATGTTGGAGTTGATCCAAGAGGGAGGGGACGAGGGTATGCACGCCCTACAGGGGTTGCACCCAAACGATCCTCTTTGAAGCCTTTACATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCACAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCCTTAAATGTTCCAAAACCTGCTGATTCTGCTGGAAAAGCTGGAGGAAAGGGCAAGTCTGCTGGATCTAAATCTGACAGAATCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTCTGGACGAGTCAGTTTTAGATGTTGATCAAGTGGAAAATCTTATTAAGTTTTGTCCTACCAAAGAGGAGATGGATCTTATAAAGGGATACACCGGTGACAAGGAACTTCTGGGGAAGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCAAGGGTGGAATCAAAATTAAGAGTATTTTCATTCAAGATTCAGTTTGGTGCCCAGCTTACGGAATTTAAGAAGAGTTTAAACATTGTTAACTCTGCCTGTGAAGAGGTCCGAAATTCTGCTAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGCAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTTAAGTTAGATAGCCTTTTAAAGCTCACCGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTCTGCAAGGTCCTAGCTGATAAGTCACCCAAACTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGGTTCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAAGTTAAACAAGAATTTGCTGCATGTGCAAATGACGGACCTGTTTCTGCGGTTTTCCATGAGAAATTGAAAGAATTTATCGGTCTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATTCTGTAGTGGGTAGAAATGCTGATGCACTTGCGCTATATTTTGGTGAGGATCCTGCTCGTTGCCCTTTTGAGCAAGTTACCACGACCCTGCTAAATTTTATAAGGTTGTATCGGAAAGCACATGAAGAAAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAAAAGGCTAAGGGCATTAACTTGACAAAGAAGGGTGCAAAAGATAGTTGA 1554 0.4498 MFGVPPPPPPMFGAPPPPPPPGGRGPPPPPPPMFGAPPPPPPPGGRGPPPPPPPGGGGPPPPPPPGVPGAPRPPGGGPPPPPPKGGNVGVDPRGRGRGYARPTGVAPKRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSLNVPKPADSAGKAGGKGKSAGSKSDRITLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLIKGYTGDKELLGKCEQFFLELMKVPRVESKLRVFSFKIQFGAQLTEFKKSLNIVNSACEEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPKLLDFHLDLVSLEGSTKIQLKSLAEEMQAIIKGLEKVKQEFAACANDGPVSAVFHEKLKEFIGLSESEVASLTNLYSVVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLYRKAHEENCKQAELEKKKAEKEAEMEKAKGINLTKKGAKDS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1941 517 Gene3D Formin, FH2 domain 100 489 IPR042201 -
Pvu3g1941 517 Coils Coil 478 507 - -
Pvu3g1941 517 SMART it6_source 102 517 IPR015425 -
Pvu3g1941 517 MobiDBLite consensus disorder prediction 1 112 - -
Pvu3g1941 517 MobiDBLite consensus disorder prediction 495 517 - -
Pvu3g1941 517 Pfam Formin Homology 2 Domain 107 477 IPR015425 -
Pvu3g1941 517 Coils Coil 384 404 - -
Pvu3g1941 517 PANTHER FORMIN-J 7 510 - -
Pvu3g1941 517 MobiDBLite consensus disorder prediction 1 87 - -
Pvu3g1941 517 ProSiteProfiles Formin homology-2 (FH2) domain profile. 102 503 IPR015425 -
Pvu3g1941 517 SUPERFAMILY Formin homology 2 domain (FH2 domain) 180 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1941 Pvu-Chr3 40021072 40035210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1941 89 517 FH2 protein (formin) Gene Family AT5G07740 77.136 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1941 - - pvu:PHAVU_003G1878000 808.52