Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1940 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCCCGGATGTCTTGGAAGAAGATGAATATAGAGTTTATATGGGGGGGATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCAGAGAAGGGGAGAGACGCAGCCAAATCGCAGACATATTGTCTCAATATGACATGACAGTTATGGAGTACCCTCGGCAGTATGAGGGTTGTCCTGTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTCTGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAGAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGCGGGGAGCAGAAGACCCTTGAAATGGTCTACAAGCAAGCTCCAAGAGAACTACTACATGTATTGTCTCCTTTGAATCCACAGCCTTCCCACTTAAGATATCTTCAGTATATTTCCAGGAGAAATTTGGGTGCTGAGTGGCCACCATCGGAAACACCCTTATATTTGGATTGTCTGATTCTCAGAGTCCTTCCAACATTTGACGATGGAAAAGGTTGCAGGCCCGTTGTACGTGTTTATGGTCAAGACCCTTCAATTTCTGCCAATAGAAGTTCAAAGCTTCTTTTTTCAACTTCACAATCCAAAAAACATGTTCGCCACTACCTACAGGCAGAGTGCATGCTCGTGAAAATTGACTTGCATTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGATTTTGTTCGTGAGGAATTGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGGCAAATATGTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGAGAAGATGCAAATGAGACCGAGAGTGCTGAGACAGAAAGTGTTTCACCTGATGAGTTCTATGAAGTAGAAGAAATCTTCAGCAGTGTAATTGATGCACAAGAAGGTAAGACAGAGTATGATTCTCACGCTTTCCATGAAAATGCAGTGGATGATGAAACTCATAAGGAGGTCTGGAGGCTAGAGTCTGATCCTCATACTTTTGAGGATTGTCCGCCAGATGACAGGATCACCAAGCAGGTTGACAAGATGGATCCTGGTATTAATACTGTGAAAGACATCTCTATTGATGATGCGCACTATAAGTTTGATGGGAGCATAGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTCGATGATGGAGAGATTAAGTCAACTTCTACTGCAGTTATTTCTGATATGATGAAACCTCCTCTGGAAACAAAGGAAGTTACCATGCATGTGCAACAACAATTTGAAGTCATTGAAAATGAATATGACGAAGATAAGGAGGCAACAGAAAAGGAGCTAGACTCCAAGGCTGGGCACCAGATGCTTGATTTGACTGAACAAAAATCTGGTAAACTACTTTCATCCAAGAAACAACCTCCATCCAACTCGAAGCCAGTTGGAGATACAGTTGTAGCAAAGCAAAAGATTAAACAGCAAGAAACCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACTAGATGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGACAAATTTGTCTTCCACAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTTTCTGCAGTTGTTGCTTCTATTGACAGGACAAATGACCTAAAAAGCCGGAAGGTGGCCACTTCAAAATCTTCTGGCTATATAGCGGCAGAAATAGATGAAAAAGATCTACCATCACCATTGTCATCAATTATAGAGACATCTTTTCAGTTAGATACTCCAGCACAACAACAGAGCTTAGAGCAACTGCCACAGCCTCCCCCACCTCCTCCCCCTCCCCCTCCCCCTCCAGCTCACAGTAGAGTCTCTTCACAAGTTTTTGAATCCTCATCATTAAAGGATGATGTATCAGTTCAAGACTCTCCATCTCCTGGAGTATCACCATCTTCTTTGG 2242 0.4309 MALFRRFFYRKPPDRLLEISERVYVFDCCFSPDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSQIADILSQYDMTVMEYPRQYEGCPVLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHVLSPLNPQPSHLRYLQYISRRNLGAEWPPSETPLYLDCLILRVLPTFDDGKGCRPVVRVYGQDPSISANRSSKLLFSTSQSKKHVRHYLQAECMLVKIDLHCRVQGDVVLECIHLSDDFVREELMFRVMFHTAFVRANMLMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVREDANETESAETESVSPDEFYEVEEIFSSVIDAQEGKTEYDSHAFHENAVDDETHKEVWRLESDPHTFEDCPPDDRITKQVDKMDPGINTVKDISIDDAHYKFDGSIDSDPHAVKDIAVDDGEIKSTSTAVISDMMKPPLETKEVTMHVQQQFEVIENEYDEDKEATEKELDSKAGHQMLDLTEQKSGKLLSSKKQPPSNSKPVGDTVVAKQKIKQQETHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNLSSTKEKMEDAKTRSLSAPVVSAVVASIDRTNDLKSRKVATSKSSGYIAAEIDEKDLPSPLSSIIETSFQLDTPAQQQSLEQLPQPPPPPPPPPPPPAHSRVSSQVFESSSLKDDVSVQDSPSPGVSPSSL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1940 747 MobiDBLite consensus disorder prediction 536 590 - -
Pvu3g1940 747 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Pvu3g1940 747 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Pvu3g1940 747 SMART PTEN_C2_2 198 338 IPR014020 -
Pvu3g1940 747 MobiDBLite consensus disorder prediction 677 696 - -
Pvu3g1940 747 MobiDBLite consensus disorder prediction 697 716 - -
Pvu3g1940 747 MobiDBLite consensus disorder prediction 671 747 - -
Pvu3g1940 747 MobiDBLite consensus disorder prediction 718 747 - -
Pvu3g1940 747 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Pvu3g1940 747 MobiDBLite consensus disorder prediction 509 590 - -
Pvu3g1940 747 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Pvu3g1940 747 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Pvu3g1940 747 PANTHER FORMIN-J 1 720 - -
Pvu3g1940 747 Gene3D - 205 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1940 Pvu-Chr3 40017646 40020708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1940 1 638 FH2 protein (formin) Gene Family AT5G07740 61.728 0.0 788
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1940 3 40017646 40020708 Pvu3g1940 3 40017646 40020708 ECH