Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1934 ATGTCAGAGCAGGAAACTCATTCTTGTGGCTTACTCTTGTTCTTTTTCTTGGTCCTTCTTTCAGGTAACGTTGTTGTAGGGGAATCTTTGGAAACAGACAAAGAGGTTCTGCTGAGGCTGAAATCGTACCTGGACAGCAAAATTCTTGCAGACAAAGGAGCGTACATAAACTGGAATACCAGTACCTCCAATCCTTGTGAATGGAGTGGAATTTCATGCAGTGCTACGGGGAGGGTGGTTCGCATAAGCCTTTCTCGGAGTGACATCACCGGTGAGATATTCAAGAATTTCTCGCAGCTCACTGAACTCGTGCACCTTGATCTCTCTCAGAACACGCTCTCTGGTGAGATTCCTGAGGACTTGAGGCGCTGCCACAAGCTCGTGCATCTCAACCTATCACATAATATTCTTGAAGGGGAGCTGAACTTGACTGGATTGACAAGCTTGCACACACTGGACTTGTCAAATAACAGATTTTTTGGGGATATTGGATTGAATTTCCCTGCCATTTGTGACAATTTAGTCACTCTGAACGTCTCAGGTAATAATAACTTGACTGGCAGGATTGAAAACTGCTTTGATCAATGTCTCATGTTGCAGTACTTGGATTTGAGCACCAACAATCTGAGTGGAAGCTTGTGGATGAAGTTTGCCAGGCTCAAAATGTTTTCTGTCGCGGAGAACCATCTAAGTGGGACTATTCCTTTGGAAGCTTTGCCTTTGAATTGTAGCCTTAAAGAACTAGACCTTTCGCAAAATGGATTTGTTGGTGAGGCACCTAAGGGGTTTGATAACTGCAAGAATTTAAGCAGTCTGAATCTTTCTAGTAACAAATTTACTGGGGGTATTCCTGTAGAGATAGGATCCATTTCGCAGCTCAAAGCATTGTACTTGGGGAACAACAGCTTTTCAAGAGAGATTCCCGAGTCCCTTCTGAACTTAACCAATTTGACCTTCTTGGATTTGAGCAGAAATCAATTTGGTGGGGAAATACAAGAGATATTCGGAAAATTTAAGCAAGTGAGTTTTCTTCTGTTGCACTCAAATAATTACACTGGAGGATTGAAATCCTCAGGAATTCTCACATTGCCAAACATTTGGCGGTTAGACCTAAGCTACAACAACTTTTCAGGTCCGTTACCAGTTGAGATCTCTCAAATGTCAAGTCTGAAGTTTCTAATGTTATGCTACAACCAGTTCAATGGATCCATTCCACCGGAATTTGGAAACATGACTCAACTGCAAGCGCTTGACCTTGCCTTCAACAATTTGAGTGGCTCTATACCACCAACCCTTGGAAACTTGAACTCCCTCTTATGGTTGATGCTCGCAAACAATTCTTTAACTGGAAAAATCCCTCCAGAGTTGGGAAACTGTTCAAGCTTGTTATGGCTAAACCTTGCCAACAATAAGCTCTCTGGAAAATTGCCTTCTGAACTGTCCAAAATTGGAAGGAATGCAATGGCCACATTTGAATACAATAGGAAAAACTATAGAATGGTTGCTGGATCTGGTGAATGTTTGGCAATGAGGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATAGCCTTTTAACAAGGAAAAAATGTAGAGAACTTTGGGACAAACTGATCAAAGGGTATGGTGTTTTCCCGTTTTGTGAACCTGGTTCTTCCTTTCGTGTAACACAGATATCCGGGTATATTCAGCTAAGTTCGAACCAGCTCAGTGGTGAAATTCCTCCAGAGATTGGGTCAATGGTCAACTTCAGCATGATGCACTTGGGGTTCAACAATCTCTCTGGGAAGTTACCTCGAGAGATAGGAACTATTTCCATGGTGGTATTAAACATCACAAGAAACGAGTTTTCAGGCGAAATTCCCCAAGAAATTGGCAACATGAAATGCCTGATGAATCTAGATCTGTCATACAACAATTTCTCGGGAATGTTTCCAACGAATTTAAACAAATTGACAGAGCTTAACAAGTTCAACATCTCATACAATCCCTTCATATCAGGTGAGGTCCCATCAAACGGACAGTTCGTTACCTTTGAAGAAAATTCATATTTAGGCAACCCCCTTTTGATCCTACCCGAGTTTATTCAGAACACTACCAATGATAGAAACACCACCTCTCAAAAAGACCATAAAAAGTCCTCGAGACTGTCTGTGTTTTTGGTGTTTGCGGTTATAACACTGGTTTTCATAGTATGTGGACTTCTCACTATCTTAGTCTGCGTATCGGTGAAAGGCCCTTCAGATGAACCAAGATACCTCTTGAGGGAGACAAAACAGTGGCATGATTCCAGCAGCTCGGGATCCTCACCATGGATGTCCGACACAGTGAAGGTCATCCGTTTGAACAAGACAGCTTTCACACATGCCGACATTCTGAAAGCAACTAGCAGCTTCTCAGAGGACAGAATCATAGGAAAAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGATGGCAGACAAGTGGCAGTGAAGAAGCTCCAAAGGGAAGGCCTGGAGGGTGAGAAGGAATTCAAGGCTGAAATGGAGGTTCTGAGTGGTCGTGGCTTTGGTTGGCCTCATCCAAACCTGGTGACACTCTACGGCTGGTGCCTAAACGAGTCAGAAAAGATACTAATTTATGAGTACATAGAGGGTGGAAGCTTGGAGGATGTAGTGACTGACAGAACACGTTTGACATGGAGGAGGAGGCTAGAAGTGGCAATTGATGTGGCACGTGCACTAGTGTATCTACACCACGAGTGCTACCCTTCTGTTGTGCACAGAGATGTGAAGGCTAGTAATGTGTTACTAGATAAAGATGGGAAGGCCAAAGTAACTGATTTTGGGCTTGCGAGAGTGGTTGATGTTGGGGATAGCCATGTGAGCACTATGGTGGCTGGGACAGTGGGGTATGTTGCACCTGAATATGGACACACATGGCAGGCTACTACAAAAGGGGATGTGTACAGTTTTGGGGTGTTGATTATGGAGCTTGCAGCAGAAAGAAGAGCAGTGGATGGAGGGGAAGAGTGCTTGGTGGAATGGGCTAGGCGTGTTATGGGTTATGGACGACACCGTCATAATCATCATGGGTTGAGTCGTTCTGTGCCAGTTTTGGTGATGGGTTCTGGGCTTCTTGGTGGGGCTCAGGAGATGAGTGAGTTGCTGAGGATTGGGGTGATGTGCACAGCTGATGCACCACAGGCTAGGCCTAACATGAAAGAGGTTCTTGCTATGCTCATTAAGATATTTAACCCCATTCCCCACTCCAGTTATGGATACCTTGTTTAG 3285 0.4402 MSEQETHSCGLLLFFFLVLLSGNVVVGESLETDKEVLLRLKSYLDSKILADKGAYINWNTSTSNPCEWSGISCSATGRVVRISLSRSDITGEIFKNFSQLTELVHLDLSQNTLSGEIPEDLRRCHKLVHLNLSHNILEGELNLTGLTSLHTLDLSNNRFFGDIGLNFPAICDNLVTLNVSGNNNLTGRIENCFDQCLMLQYLDLSTNNLSGSLWMKFARLKMFSVAENHLSGTIPLEALPLNCSLKELDLSQNGFVGEAPKGFDNCKNLSSLNLSSNKFTGGIPVEIGSISQLKALYLGNNSFSREIPESLLNLTNLTFLDLSRNQFGGEIQEIFGKFKQVSFLLLHSNNYTGGLKSSGILTLPNIWRLDLSYNNFSGPLPVEISQMSSLKFLMLCYNQFNGSIPPEFGNMTQLQALDLAFNNLSGSIPPTLGNLNSLLWLMLANNSLTGKIPPELGNCSSLLWLNLANNKLSGKLPSELSKIGRNAMATFEYNRKNYRMVAGSGECLAMRRWIPADYPPFSFVYSLLTRKKCRELWDKLIKGYGVFPFCEPGSSFRVTQISGYIQLSSNQLSGEIPPEIGSMVNFSMMHLGFNNLSGKLPREIGTISMVVLNITRNEFSGEIPQEIGNMKCLMNLDLSYNNFSGMFPTNLNKLTELNKFNISYNPFISGEVPSNGQFVTFEENSYLGNPLLILPEFIQNTTNDRNTTSQKDHKKSSRLSVFLVFAVITLVFIVCGLLTILVCVSVKGPSDEPRYLLRETKQWHDSSSSGSSPWMSDTVKVIRLNKTAFTHADILKATSSFSEDRIIGKGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGRGFGWPHPNLVTLYGWCLNESEKILIYEYIEGGSLEDVVTDRTRLTWRRRLEVAIDVARALVYLHHECYPSVVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLIMELAAERRAVDGGEECLVEWARRVMGYGRHRHNHHGLSRSVPVLVMGSGLLGGAQEMSELLRIGVMCTADAPQARPNMKEVLAMLIKIFNPIPHSSYGYLV* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1934 1094 Pfam Protein kinase domain 802 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1934 1094 Gene3D Transferase(Phosphotransferase) domain 1 881 1086 - -
Pvu3g1934 1094 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1085 - -
Pvu3g1934 1094 SUPERFAMILY RNI-like 73 284 - -
Pvu3g1934 1094 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Pvu3g1934 1094 SMART serkin_6 801 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1934 1094 Gene3D Ribonuclease Inhibitor 32 142 IPR032675 -
Pvu3g1934 1094 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Pvu3g1934 1094 Pfam Leucine Rich repeat 147 165 IPR001611 GO:0005515
Pvu3g1934 1094 Pfam Leucine Rich repeat 314 330 IPR001611 GO:0005515
Pvu3g1934 1094 Gene3D Ribonuclease Inhibitor 357 502 IPR032675 -
Pvu3g1934 1094 Gene3D Ribonuclease Inhibitor 554 710 IPR032675 -
Pvu3g1934 1094 Gene3D Ribonuclease Inhibitor 143 240 IPR032675 -
Pvu3g1934 1094 Gene3D Ribonuclease Inhibitor 241 356 IPR032675 -
Pvu3g1934 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Pvu3g1934 1094 SUPERFAMILY L domain-like 554 689 - -
Pvu3g1934 1094 Pfam Leucine rich repeat 82 135 IPR001611 GO:0005515
Pvu3g1934 1094 Pfam Leucine rich repeat 244 302 IPR001611 GO:0005515
Pvu3g1934 1094 SUPERFAMILY Protein kinase-like (PK-like) 783 1079 IPR011009 -
Pvu3g1934 1094 SUPERFAMILY L domain-like 243 494 - -
Pvu3g1934 1094 SMART LRR_typ_2 411 434 IPR003591 -
Pvu3g1934 1094 SMART LRR_typ_2 100 124 IPR003591 -
Pvu3g1934 1094 SMART LRR_typ_2 387 410 IPR003591 -
Pvu3g1934 1094 SMART LRR_typ_2 314 337 IPR003591 -
Pvu3g1934 1094 SMART LRR_typ_2 146 177 IPR003591 -
Pvu3g1934 1094 SMART LRR_typ_2 435 459 IPR003591 -
Pvu3g1934 1094 ProSiteProfiles Protein kinase domain profile. 801 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1934 1094 Gene3D Phosphorylase Kinase; domain 1 766 880 - -
Pvu3g1934 1094 CDD STKc_IRAK 807 1081 - -
Pvu3g1934 1094 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1934 Pvu-Chr3 39938836 39942277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1934 57 1078 Receptor kinase-like Gene Family AT1G55610 32.420 4.34e-152 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pvu3g1934 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1934 - - gmx:100816573 1846.25