Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1897 ATGGCAGCAAAGTTCTTGCATTCTTTAGCAGATGACAGCCTAGATTTAAAAAAGCAGATAGGATGCATGACTGGGATTTTCCACCTCTTTGATCGTCACCACATTATATCTTCTCCCCGCATTACCCAGAAGAGGCTTCCTCCAGGTAATTCTCACTTCAATTATGACAGCCTGGAAAGAGGTTCTGATAGCATAAACCAGCAGCAATCAACAGCAGATATGAGGGGTATGACTGATAAGCACAAAATTTCAGCTGAATCATCAAGAACCTCGTTCTCTTCTTGTTCATCATCAATGTCCTCTTCGGACTATAAAGCTGAAGCAGATGCTCCCTTTGACAGGGTTGGTTTTCCTGAAACTCCTATTAGGGACCCAGTTATGAACCAAGCAAGTACCTCTCCCAATTTAGGATGTCCATCTCTTGACCTGAGGGATGAGGTGAAGGAGTCTATATATGGGGAAGCCAGAGGAATGTCCATAGAAGGGGATTCCCCGAGACAATTTCAGGTGTCTAAATCTGTTGATAGAAAACAGACTCCTATTGATCTAAAGGAGTCCTTGCGAGTCCTTGCTAAACTTAGAGAAACACCTCGACGTTATGTTGAAGCTAAAGAACTTCCTAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAGAAACAAGTGAGATACCTTTTCACTCGCATGACACCTTGAAATGTCCACAAAAGTTAAAAGAGCTTCCTAGACTTTCACTGGACAGTAGGGAAAGTTCATGGCGCTCAAACAGCTCTGATTCAAAACCCAGTAACCTCTCAAAAAATTTCAATGCAGGTGGTACCTCCACCTCAGATGACAACATTTCTAGTCTACGACAGCCTTCAGCATCCCAGAGACGGTCACCTAGTATTGTAGCAAAATTAATGGGTTTGGAAACATTGCCAGAATCCTGTGAGGCTAGTGATACTAACTCAAATTTTAGTGAAAATGACTCAACTCAAGGTAATGGTCAGTTTGGGAAAAATGGATTCGTTAGACCACTTCGAGTTTCTAATTTCCCTGAAGTCCCATTGAAAGAGAAAGAGATGACTTCCCCACAATGCAAGAATCTTGATTTGGTTGTGAAACCAATCTTGAGTACAAGGTTTCCCATTGAACCTGCACCATGGAAGCAGCAGGATGGAAACCAAAGCTCTGAGAAACTAACTTCCAGGGCCATAAAACCTGTAGCAAGAACTCCAGATTCATTTCCTTCAGTTTATAGCGAGATTGAGAATAGATTGAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTTAAACGGATATTGGAAACAATGCAAGTAAAGGGTCTGTTAGAGACCAGAAAAGAAGAACAAGCTTCAGATGTTGTTCGAAATAAAAGAGACTATGAACTAAATTCGACCTCAATTCAGCATTCTATGAGGCAGGAAACAGCCTGGGAATCTGGTTATGCAATTGCTGTAGAGTCACCTATAGTGATCATGAAACCAGCAAAAATTGTTGAGAAAACTGGAGTTTTTACTTCTTCGGTCTTTCCAATTAATGAACTTTCTTATTCCCACAAACTTCATAGTGATGGTGTACACGTACATGATAAAAAAGGGACAGCTTCCAGTCAAATAGCAAAAGATCAGTCTCCTAGAAACAGTCCCAAGGATGCTTCTATCAGTTTTAGTGAAAATAAAGCAAATAGTATGAAGACTATAAAATCAACACAATCCCAACCAAGGTCTACACAATTTCCAAAAGAAAATGGCCCAAACTCAGTAAAGAATTCAGGATCTGTTAGCCCAAGAATGCAACAGAAGAAGTTAGAATCGGAGAAGCAATCTTGTCTTCTTACCCCATCATCAGATTCAAATAATCCCAGAAGGCAGTCCTTGAAGCAGACAACATACCCAGATTCTCCCAGTCAAAAACTGAGACCTAAAGTCCATAATTCACAGAGCAGTGATGACCGACTCAGTGAGACTAGCAACGAACTGAGAAGTTTAAGTAGCCAGTGGGATGAAGTATCTCTTCAATCAGACAGTATCACTTTCGACTCAAAGATGGATATTGAAGTTACCAGCAGTTTACAATCTGCTGAAATTATTGATAGCCAATGCCCATCTAGGAAGGTTATTGAGCATTTAGTTTCAGGATCCATGCATAAGAAATCAACTCTGAGGTGGGATGAGGATGAATCAATTGCAGAACTCGCAACACATGCCTCTGATCATCCAAGTCTTGGATCAGTTGTCGATGTCTCAGTGTACAAATTCGGTATGCCATCGCCAGTAAAGAGTATATCCAATTCTTGTAAAGTTGACAACGCTCAAGAATCTAAAGAAAATTATCATACAGATCAGTGGAGCCCTGCAGATGACCTCTTCGTTAACAACAGAAGATATAGAGAGATCAACCACAAGAAATTGCAAAGCATAGGTCGCCTTATTCAAAAGCTTAGACAGCTAAACTCAAGTCATGATGAAACTAGAATCGATTACATAGCTTCCCTTTGTGAAAATACAAACTCAGACCACAGATATATTGCTGAAATACTGTTGGCTTCAGGTCTACTACTGAGAGCTTTGAGTTCTGAGTTGCTGACATTTCAACATCACTCATCAGGTCATCCCATTAACCCTGAGTTATTCCTTGTGTTGGAGCAGACCAAATTAAGTAGTTTGCTTTCAAAAGAAGGGGGCACCGCTGGAAAAATTGCTTATAGAAAGCTAAATACAGAGAAGTGGCACAGGAAGCTCATCTTTGATACTGTGAATGAGATTCTTGGTACAAAGCTAGGCTCTTCTCGTGAGCCATGGTTGAAGCCTGATGGACTTGCAACGAAATTCGTCACTGCACAAAAGCTTCTTAAAGAACTTTGCTTTGAGATACAAAAACTTAATTATGTGAAGCCAGATTGCAGTTTAAAAGATGAAGGGGATGGTCTGAAAAGTATGCTAGAGGAATATGTGATGCATCCCTCAGAAAACTGGACATGTTTCCCTGGTGAATTACCCGGGGTTGTGTTGGATGTTGAGAGGCAGATATTTAAGGACTTAGTTGATGAGTTTGTGATTGATGAAAGTTTGCGATTGAAGGTACAGTAG 3105 0.4064 MAAKFLHSLADDSLDLKKQIGCMTGIFHLFDRHHIISSPRITQKRLPPGNSHFNYDSLERGSDSINQQQSTADMRGMTDKHKISAESSRTSFSSCSSSMSSSDYKAEADAPFDRVGFPETPIRDPVMNQASTSPNLGCPSLDLRDEVKESIYGEARGMSIEGDSPRQFQVSKSVDRKQTPIDLKESLRVLAKLRETPRRYVEAKELPKDAPRFSYDGRETSEIPFHSHDTLKCPQKLKELPRLSLDSRESSWRSNSSDSKPSNLSKNFNAGGTSTSDDNISSLRQPSASQRRSPSIVAKLMGLETLPESCEASDTNSNFSENDSTQGNGQFGKNGFVRPLRVSNFPEVPLKEKEMTSPQCKNLDLVVKPILSTRFPIEPAPWKQQDGNQSSEKLTSRAIKPVARTPDSFPSVYSEIENRLKDLEFKQSGRDLRALKRILETMQVKGLLETRKEEQASDVVRNKRDYELNSTSIQHSMRQETAWESGYAIAVESPIVIMKPAKIVEKTGVFTSSVFPINELSYSHKLHSDGVHVHDKKGTASSQIAKDQSPRNSPKDASISFSENKANSMKTIKSTQSQPRSTQFPKENGPNSVKNSGSVSPRMQQKKLESEKQSCLLTPSSDSNNPRRQSLKQTTYPDSPSQKLRPKVHNSQSSDDRLSETSNELRSLSSQWDEVSLQSDSITFDSKMDIEVTSSLQSAEIIDSQCPSRKVIEHLVSGSMHKKSTLRWDEDESIAELATHASDHPSLGSVVDVSVYKFGMPSPVKSISNSCKVDNAQESKENYHTDQWSPADDLFVNNRRYREINHKKLQSIGRLIQKLRQLNSSHDETRIDYIASLCENTNSDHRYIAEILLASGLLLRALSSELLTFQHHSSGHPINPELFLVLEQTKLSSLLSKEGGTAGKIAYRKLNTEKWHRKLIFDTVNEILGTKLGSSREPWLKPDGLATKFVTAQKLLKELCFEIQKLNYVKPDCSLKDEGDGLKSMLEEYVMHPSENWTCFPGELPGVVLDVERQIFKDLVDEFVIDESLRLKVQ* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1897 1034 MobiDBLite consensus disorder prediction 532 672 - -
Pvu3g1897 1034 MobiDBLite consensus disorder prediction 247 294 - -
Pvu3g1897 1034 MobiDBLite consensus disorder prediction 244 294 - -
Pvu3g1897 1034 MobiDBLite consensus disorder prediction 70 98 - -
Pvu3g1897 1034 Pfam Domain of unknown function (DUF4378) 844 1022 IPR025486 -
Pvu3g1897 1034 PANTHER LONGIFOLIA PROTEIN 1 1032 - -
Pvu3g1897 1034 MobiDBLite consensus disorder prediction 542 648 - -
Pvu3g1897 1034 PANTHER LONGIFOLIA PROTEIN 1 1032 IPR033334 GO:0051513
Pvu3g1897 1034 MobiDBLite consensus disorder prediction 122 141 - -
Pvu3g1897 1034 MobiDBLite consensus disorder prediction 308 335 - -
Pvu3g1897 1034 MobiDBLite consensus disorder prediction 309 332 - -
Pvu3g1897 1034 Pfam DUF761-associated sequence motif 288 309 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1897 Pvu-Chr3 39549116 39554994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1897 127 1034 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 44.142 3.26e-179 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1897 - - gmx:100775311 1409.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1897 3 39549116 39554994 Pvu3g1897 3 39549116 39554994 ECH
Pvu3g1897 3 39549116 39554994 Pvu9g2087 9 29949125 29955156 PCT