Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1892 ATGTCATTGGAACTTTGCTCTCTCTTCTTACCGCTACCTACTTGCTCAACTATACTCACTTTTGATGTTTTGCTCGGTGTTATGTTCCTGGTAGCCATTTTTGGCTATTGGCTGGTTCCTGGTGGTCTTGCTTGGGCTTTGTCTAAGTTTAGACAGGGAAAATCTCTGGCCAACAAACCTGCCATTCCCGGACCTTCTGGTTTTCCGGTGGTGGGTCTTGTTTCTGCTTTCACAGGACCTCTTACTCACAGAGTCCTTGCTAAGCTTGCTCATACCTTTGATGCCAAGCCTTTGATGGCATTCTCCTTGGGGTTTACTCCTTTCATCATCTCTTCTCACCCAGACACTGCCAAAGAGATGTTGAGCAGTTCAGCTTTCGCTGACCGTCCTATCAAGGAATCTGCTTACGAGCTCCTCTTCCATCGGGCAATGGGCTTTGCCCCATACGGTGAGTACTGGAGGAGCCTGAGGAGAATTTCCGCCACTCACATGTTCTCTCCAAAGAGAATTGCGGCCTCCGGGAAGTTCCGGACTGAGGTTGGGGCTCAGATGGTGAAAGACATCATGGACCTGATGAGGAGAGATGGCGAGGTAGAGGTGAGGAAGGTGTTGCATTTTGGGTCCTTGAATAATGTTATGATGAGCGTGTTTGGGAAGAGTTATGTGTTTGGTGAGGGTGGTGATGGGTGTGAGCTTGAGGAGTTGGTGAGTGAGGGGTATGAATTGCTTGGGGTGTTTAACTGGAGTGACCACTTTCCACTTTTGGGTAGGTTGGATTTGCAAGGTGTGAGAAAGAGGTGTAGGAGTTTGGTGGATAGAGTGAACGTTTTTGTGGGAAAAATCATAGTGGAGCACAGGGAAAAGAGAGCTGCTGTTGGTGAGGATAAGGTCAAGGATAATGAGAGTTCTGGTGACTTTGTTGACGTGCTTTTGGATTTGGAAAAAGAGAACAAACTTGAACACTCTGACATGGTTGCTGTTTTGTGGGAAATGATATTTAGGGGGACTGATACAGTGGCAATACTCCTGGAATGGATTCTTGCAAGGATGGTTTTACATCCTGAAATCCAAGCGAAGGCTCAATCTGAAATAGACTCAGTTGTTGGGTGTAGACGCAGTGTGAGTGATAAAGATCTTCTCAACCTTCCTTATGTGAGGAGCATAGTGAAAGAAACTTTGAGGATGCATCCACCGGGTCCTCTTCTGTCATGGGCCAGGCTTTCCATTCATGACACACAAATTGGCAATCACTTTGTTCCAGCTGGCACCACCGCTATGGTTAACATGTGGGCCATCACACATGACAAAGAAGTGTGGTCTGATCCAGAAGAGTTCAAACCAGAGCGTTTTGAGAAGGAGGAGGTACAAATAATGGGGTCTGATCTGAGGTTGGCACCTTTCGGGTCTGGGAGAAGAGTGTGCCCTGGGAAAGCCATGGGTCTGGCCACTGTTGAGCTTTGGCTTGCTATGTTCCTACAACAGCTGAAATGGATACCTTCTGATTCTGGGGTGGACCTCTCTGAGTGCCTCCAACTCTCCATGAAAATGAAATGCTCTCTCATCACCAAAGTTGTTACAAGGCCTTCTCCTTTCATACCTTCTGTATCCCACTATTTCCCTTGA 1623 0.4726 MSLELCSLFLPLPTCSTILTFDVLLGVMFLVAIFGYWLVPGGLAWALSKFRQGKSLANKPAIPGPSGFPVVGLVSAFTGPLTHRVLAKLAHTFDAKPLMAFSLGFTPFIISSHPDTAKEMLSSSAFADRPIKESAYELLFHRAMGFAPYGEYWRSLRRISATHMFSPKRIAASGKFRTEVGAQMVKDIMDLMRRDGEVEVRKVLHFGSLNNVMMSVFGKSYVFGEGGDGCELEELVSEGYELLGVFNWSDHFPLLGRLDLQGVRKRCRSLVDRVNVFVGKIIVEHREKRAAVGEDKVKDNESSGDFVDVLLDLEKENKLEHSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQSEIDSVVGCRRSVSDKDLLNLPYVRSIVKETLRMHPPGPLLSWARLSIHDTQIGNHFVPAGTTAMVNMWAITHDKEVWSDPEEFKPERFEKEEVQIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAMFLQQLKWIPSDSGVDLSECLQLSMKMKCSLITKVVTRPSPFIPSVSHYFP* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1892 540 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Pvu3g1892 540 PANTHER CYTOCHROME P450 78A7-RELATED 20 527 - -
Pvu3g1892 540 Pfam Cytochrome P450 63 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 527 - -
Pvu3g1892 540 SUPERFAMILY Cytochrome P450 62 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g1892 540 Gene3D Cytochrome P450 48 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1892 Pvu-Chr3 39501091 39503000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1892 1 527 Cytochrome P450 AT1G74110 63.265 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1892 K20619 - gmx:100811042 863.988