Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1891 ATGGAGTCTGTGTGGTTGTCAACCACTGGATCTGCTGTCCCCCGTAGTGGCTTCTTGGCCTTCTTACTGCTGTCACTGCTCTTGTGCACTACATTCTCTTCTACTGAAGCCTATGATGCACTTGATCCGACCGGAAACATCACTATCAAATGGGATGTCATAAGCTGGACACCAGACGGCTATATGGCTGTTGTCACAATGTACAACTTTCAACAGTATCGGCATATTGAGGCCCCTGGATGGATACTAGGGTGGACATGGGCAAAAAAGGAAGTAATTTGGAATGTAATGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAGGTTCAAAGGGAACATCCCTCATTGTTGTAAGAAGGATCCAACCATAGTGGATTTACTGCCTGGAAGTCCTTACAACCAGCAGATTGCGAATTGTTGCACTGGGGGAGTCCTAACCTCATGGGCCCAGGACCCTGAACATGCAATAAGCTCATTTCAACTCAGTGTTGGTTCTGCAGGAACAACCAACAAAACGGTCAAACTACCAAGAAATTTTACCCTGAAAGCACCAGGGCCTGGTTATACTTGTGGCCCTGCAAAGATTGTGAAACCAACTAAATTTATTACCAAAGACAAGAGGAGAAGCACTCAAGCATTGATGACCTGGAATGTAACGTGCACGTATTCTCAATTCCTAGCTCAGAAGACCCCAACGTGCTGTGTTTCTCTTTCATCCTTCTACAACAGTACAATAGTAAACTGCCCTACCTGCACCTGTGGTTGCCAAAACAGAACAGAACCTAGCAGCTGTGTAGATCCCAATTCCCCACATCTAGCTTCAGTAGTATCGCCACCAGGCAAATCTATAAATACACCTCTGGTCCGGTGCACCAATCATATGTGTCCTATTAGAGTGCATTGGCACGTGAAACTTCAATATAAAGAGTACTGGAGGATCAAAATCACAATCACAAATTTCAATTACGTAGTGAACTATTCACAATGGAACCTTGTTGTGCAGCATCCAAACTTTGACAATGTAACGCAGGTTTTCAGCTTTAACTACAAGCCGCTAACGCCTTATGTGGGCTTAAATGATACTGGTATGCTGTGGGGAGTCAAGTTCTACAATGATTTACTTACTTCAGCAGGACCCTTCGGGAATGTGCAGTCTGAGCTCTTATTCCGAAAGGACAAATCAACCTTCACATTTGATAAGGGATGGGCTTTCCCTCGAAGAATTTATTTCAATGGAGACAACTGTGTAATGCCACCTCCTGATGCCTATCCATGGCTGCCCAATGCAAATTCAAAACTAGTTTTCTCTTTACTAAGCACAGTTTTTGGCACTTTAGCTTGTGTGGTAATGTTATTGACTTAA 1365 0.4418 MESVWLSTTGSAVPRSGFLAFLLLSLLLCTTFSSTEAYDALDPTGNITIKWDVISWTPDGYMAVVTMYNFQQYRHIEAPGWILGWTWAKKEVIWNVMGGQTTEQGDCSRFKGNIPHCCKKDPTIVDLLPGSPYNQQIANCCTGGVLTSWAQDPEHAISSFQLSVGSAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRSTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNSTIVNCPTCTCGCQNRTEPSSCVDPNSPHLASVVSPPGKSINTPLVRCTNHMCPIRVHWHVKLQYKEYWRIKITITNFNYVVNYSQWNLVVQHPNFDNVTQVFSFNYKPLTPYVGLNDTGMLWGVKFYNDLLTSAGPFGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNANSKLVFSLLSTVFGTLACVVMLLT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1891 454 PANTHER COBRA-LIKE PROTEIN 14 452 - -
Pvu3g1891 454 PIRSF COBRA 11 454 IPR006918 GO:0010215|GO:0031225
Pvu3g1891 454 PANTHER PROTEIN COBRA 14 452 IPR006918 GO:0010215|GO:0031225
Pvu3g1891 454 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1891 Pvu-Chr3 39486002 39489658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1891 24 453 COBRA Gene Family AT3G02210 73.041 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1891 - - vun:114177145 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1891 3 39486002 39489658 Pvu3g1891 3 39486002 39489658 ECH
Pvu3g1891 3 39486002 39489658 Pvu9g2095 9 30043599 30047021 PCT