Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1876 ATGGAATGCAATGAAGATGATGAGCTCCATGTAGCCCCTTATGCTTCCTTAACACAGTGCTTTCGCTATCTTTCTCCAACCCAGAAACCTATCCTGACCTCAACAATGGAAACTGATGAAGGCCATACTTTGACCCATCTGGATCAACCTCATAGTTTACACCATATTCCATTTTTCTACTCCCAATTGCACCTTCCAAGCACCAGCCACAACCCAATTCAAGTCCCACTCCATAAATCCTCTCCCAACACATCATCAAATAGTAACAACAATAACAATTCTGATGAAGCAAAGGCTCTCCTTGATGACAGAAAGAAGAAGAGGATGTTCTCCAACAGAGAATCTGCTCGCAGGTCTCGCATGCGAAAGAAGCAACAGATTGAACTCCTGCAGTATCATGTGGATCATCTGCAGACACTAAACCATCAACTCTCCGAAAAGATCATTTACTTGCTGGAATGTAACCAACAAATCCACCAACAGAATGCTCAGCTAAAAGAGAAAGTTTCCTCTCTTCAGGTAGCACTCTCTGACTTGTTGGTTCCTGAAGGAGGTGCCGAGCAACCACACCACATCCCTAATGGCTTCCTAGTTGAGCCTTCAACTAGAGCAATTGCAAGTTCCATAGTATAG 633 0.4376 MECNEDDELHVAPYASLTQCFRYLSPTQKPILTSTMETDEGHTLTHLDQPHSLHHIPFFYSQLHLPSTSHNPIQVPLHKSSPNTSSNSNNNNNSDEAKALLDDRKKKRMFSNRESARRSRMRKKQQIELLQYHVDHLQTLNHQLSEKIIYLLECNQQIHQQNAQLKEKVSSLQVALSDLLVPEGGAEQPHHIPNGFLVEPSTRAIASSIV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1876 210 Pfam bZIP transcription factor 103 162 IPR004827 GO:0003700|GO:0006355
Pvu3g1876 210 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Pvu3g1876 210 MobiDBLite consensus disorder prediction 97 121 - -
Pvu3g1876 210 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 203 IPR044521 -
Pvu3g1876 210 Coils Coil 155 175 - -
Pvu3g1876 210 Gene3D - 103 157 - -
Pvu3g1876 210 CDD bZIP_plant_GBF1 105 153 IPR045314 GO:0003700|GO:0006355
Pvu3g1876 210 MobiDBLite consensus disorder prediction 70 96 - -
Pvu3g1876 210 SUPERFAMILY Leucine zipper domain 104 160 IPR046347 GO:0003700|GO:0006355
Pvu3g1876 210 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Pvu3g1876 210 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 1 203 - -
Pvu3g1876 210 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Pvu3g1876 210 MobiDBLite consensus disorder prediction 70 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1876 Pvu-Chr3 39306174 39306806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1876 102 187 bZIP Transcription Factor Family AT5G60830 61.628 9.38e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu3g1876 bZIP_1 1.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1876 - - gmx:102664001 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2107 9 30188193 30188759 Pvu3g1876 3 39306174 39306806 PCT