Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1872 ATGAATGAGACGATGGTTAACAATGGGACGGGGAGGTTCAACTGGAGCTGGGACTCCTCTGCGTCGTTTGTGTACGGTGGGCTTGCGCCCATTTTTGGATTGATTTGTTTTGCGTTGGTTGTGACGGCGTGTTCAGGGTGTGGAAGAAGGTCGGAGTCTGAAAGGGAGAGGGAGGCTGAGATGAACGTGATGAGGAGATCGGTAACAAGCGACGCACAAATTGATGCAGAGCCCAACATTTTGGTAATCGTTGCTGGAGAACAACACCCAACTCATTTGGCCAAGCCTCTTTCTTCCTCTCACAATCAGTGA 312 0.5032 MNETMVNNGTGRFNWSWDSSASFVYGGLAPIFGLICFALVVTACSGCGRRSESEREREAEMNVMRRSVTSDAQIDAEPNILVIVAGEQHPTHLAKPLSSSHNQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1872 103 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 4 97 IPR040359 GO:0080143
Pvu3g1872 103 PANTHER PROTEIN, PUTATIVE-RELATED 4 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1872 Pvu-Chr3 39253716 39254315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1872 17 100 Glutamine Dumper (GDU) Family AT4G25760 36.471 7.16e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1872 - - pvu:PHAVU_003G181100g 191.045