Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1855 ATGGCTGGGGGGAGAAGGAGGAGGCACCACTTCGGCAGAATCCATGCATTCACGTGTGGGAAGGCTTCCATGAAGGAAGAACATTCACTGATTGGAGGCCCTGGCTTCTCAAGGATAGTCTATTGCAATGACCCTGAACGTGCCACCTCGAGTCTTCTCAATTATGGTGACAATTATGTCAGAACAACTAAGTATACATTGGCCACGTTCCTCCCCAAGTCCTTGTTTGAGCAGTTCAGGAGGGTTGCAAATTTCTACTTCCTCGTTTGTGCAGTTTTGTCTTTCTTTCCAGTATCTCCTTACTCTGGCGTCAGTAATGTTGTCCCTCTACTGGTTGTGGTAGCTGCCACAATGGTCAAAGAGTTCATTGAGGATTTTAGGAGGAAACAACAGGATATAGAGATGAATAACAGAAAAGTTAAAGTGCATGGTGGAAGTGGTGATTTTGCCTATTCTAAATGGAGGGATTTGAAAGTTGGAGATGTGGTGAGGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTCGCGTCAAATTATGATGATGCAATTTGCTATGTTGAGACTATGAATCTTGATGGAGAGACAAATCTGAAACTGAAACAAGCATTGGAAGGAACTTCAAAGTTGCAAGAAGACTCGAGCTTTCAAAATTTCAGGTCTGTCATCACATGTGAAGATCCAAATGCAAATTTGTACACATTTGTTGGAAGTATGGAGCTTGATGATCAACAGTATCCTCTTGCACCTCAACAGCTACTTCTCAGGGACTCTAAGCTGAGGAACACAGATTTTGTTTATGGTGTGGTAATCTTTACTGGACATGATACAAAGGTTATGCAGAATGCAACAGACCCTCCATCCAAGAGAAGCAAAATTGAGAAAAGGATGGATAAGATTATCTACTGCCTCTTCTTTCTACTTATTCTGATTTCTTTCATTGGGTCCATATTCTTTGGGGTTATAACAAATGATGATATTGAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGATACCGAAATTTACTATGATCCTAATGAACCAGTAGCTGCTGCAATTCTGCATTTCCTGACAGCACTTATGTTGTATAGTTACTTGATTCCGATTTCCTTGTATGTATCCATTGAAATTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAGGATGTGAATATGTATTATGCGGAAACTGACAAGCCAGCACATGCTCGTACATCAAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTTTCAGATAAGACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTACGGACGAGGAGTTACAGAAGTTGAGAGAGCTCTATCTAGGAGACATGAATCAGATTCAGTTCAAGAGTTGAAAGAAGTAAAAAACATTGCAAAGGTTGGTGAATCAAAGTCATCCATTAAAGGGTTTAACTTTATGGATGAAAGGATCATGAACGGAAGTTGGATCAAAGAACCCAATGCCAATGTAATCCAGAACTTCCTAAGACTGCTGGCTGTATGCCACACTGCAATTCCTGAAATTGATGAAGGAACTGGTAAGGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGGGAACTTGGATTTGAATTTTATGAAAGGACACATACAGCAATTTCACTGCGTGAATTAGACCCGATAACAGGCCTGAAAACTGAAAGGTCCTACAAAATTTTGAATGTATTGGAGTTTAGTAGTGCAAGGAAGCGGATGTCTGTAATTGTAAGAGATAAGGAGGGGAAACTGTTGCTTCTCAGCAAAGGCGCTGACAGTGTAATGTTTGAACGAATTGCAAAGAATGGAAGGGATTTTGAAGAGAACACCAGGCAACATATCAGTGAATATGCTGATTCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTTAATGAGGAAGAGTACTATCAATTTAATAAAGAGTTCACAGAGGCCAAGAACTTAGTGAGTGCAGACCAGGAGCAGATTGTTGACGGCATAATACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTACAAGACGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGAATTAAGCTATGGGTTTTAACTGGTGATAAAATGGAGACAGCAATTAATATAGGATTTTCTTGTAGTTTACTCAGACAAGGAATGAAACAAATTATAATTAGCTCAGATACTCCAGAAAACAAAGCATTGGAGAAAATGGAGGACAAGTCTGCTGCTGATGTGGCAATTAAGTCAAGTGTTATTCGTCAATTAAGGGAGGCAAGTGCATTACTTTCTTCATCAGATGAAAATTATGAGGCCTTAGCCCTGATCATTGATGGGAAGTCTCTTACATATGCACTAGAAGATGGTGTAAGTGATTTGTTCCTCGAACTTGCCATTGGCTGTGCATCTGTTATCTGCTGTCGATCCTCTCCCAAGCAGAAAGCACTTGTTACAAGACTGGTGAAGATGAGAACTGGCAGTACAACACTAGCTATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTGGAAGGCATGCAGGCTGTTATGTCAAGTGATATTGCAATAGCCCAATTTCGGTTTCTTGAGCGGTTACTTCTTGTGCACGGACATTGGTGTTACAGAAGGATATCATCAATGATCTGCTACTTCTTTTACAAGAATATTGCCTTCGGCTTCACTCTGTTCTTCTTTGAGATATATGCCTCATTCTCCGGGCAAGCTGCATACAATGATTGGTTCATGTCCCTATATAATGTATTCTTCACTTCACTTCCTGTAATTGCATTGGGAGTCTTTGATCAGGATGTCTCTTCCAAATTATGTCTCAAGTTTCCATTATTGTACCAAGAAGGCATCCAAAACATCCTATTTAGCTGGAAACGGATCATCGGTTGGGTAGTTAATGGAGTTGTGACTTCTGCCATAATATTCTTCTTTTGCATCCATGCCATGGAACAGCAGGCATTCCGCAAAGGAGGTGAAGTTGTGGAGCTGGAAGTTCTTGGTGCCACCATGTACACCTGTGTTGTGTGGGTGGTGAATTGCCAAATGGCATTATCTATCACTTACTTCACTTATGTACAACATATATTCATCTGGGGAAGCATTATATTCTGGTATATATTCCTCTTGGCATATGGAGCCATAGACCCTTCCTTCTCCACCACTGCCTATAAGGTCTTCATTGAAGCTCTTGCACCAGCACCATATTTCTGGATTATCACTTTGCTCATTCTCATTGCCTCCCTCCTTCCATATTTCGTCTATGCGTCCATCCAAATGCGTTTCTTCCCCATGTATCATCAAATGATTCAATGGATAAGGAAAGACGGCCAAACAAGTGATCCAGAATACTGCAATATGGTAAGGCAGCGATCAATAAGACACACAACAGTTGGATTCACAGCTCGTTTGGAAGCATCCAAACGTTTTAATGCATCCAGAAGAGTTGAATCATCATCAAGACCTGAAACAGCATCCACAATACTTGAATCATCCAACCATTCTGAAGGGCAGTTTGAGGACCGATAA 3657 0.4077 MAGGRRRRHHFGRIHAFTCGKASMKEEHSLIGGPGFSRIVYCNDPERATSSLLNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGVSNVVPLLVVVAATMVKEFIEDFRRKQQDIEMNNRKVKVHGGSGDFAYSKWRDLKVGDVVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSSFQNFRSVITCEDPNANLYTFVGSMELDDQQYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFLLILISFIGSIFFGVITNDDIENGRMKRWYLRPDDTEIYYDPNEPVAAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDVNMYYAETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSRRHESDSVQELKEVKNIAKVGESKSSIKGFNFMDERIMNGSWIKEPNANVIQNFLRLLAVCHTAIPEIDEGTGKVSYEAESPDEAAFVIAARELGFEFYERTHTAISLRELDPITGLKTERSYKILNVLEFSSARKRMSVIVRDKEGKLLLLSKGADSVMFERIAKNGRDFEENTRQHISEYADSGLRTLILAYRELNEEEYYQFNKEFTEAKNLVSADQEQIVDGIIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFSCSLLRQGMKQIIISSDTPENKALEKMEDKSAADVAIKSSVIRQLREASALLSSSDENYEALALIIDGKSLTYALEDGVSDLFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEIYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGIQNILFSWKRIIGWVVNGVVTSAIIFFFCIHAMEQQAFRKGGEVVELEVLGATMYTCVVWVVNCQMALSITYFTYVQHIFIWGSIIFWYIFLLAYGAIDPSFSTTAYKVFIEALAPAPYFWIITLLILIASLLPYFVYASIQMRFFPMYHQMIQWIRKDGQTSDPEYCNMVRQRSIRHTTVGFTARLEASKRFNASRRVESSSRPETASTILESSNHSEGQFEDR* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1855 1218 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Pvu3g1855 1218 Pfam Cation transport ATPase (P-type) 533 623 - -
Pvu3g1855 1218 SFLD p-type atpase 406 913 IPR044492 -
Pvu3g1855 1218 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu3g1855 1218 SUPERFAMILY Calcium ATPase, transduction domain A 146 285 IPR008250 -
Pvu3g1855 1218 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 488 699 IPR023299 GO:0000166
Pvu3g1855 1218 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1140 IPR023298 -
Pvu3g1855 1218 Gene3D - 421 433 IPR023214 -
Pvu3g1855 1218 Gene3D - 434 487 IPR023299 GO:0000166
Pvu3g1855 1218 MobiDBLite consensus disorder prediction 1188 1218 - -
Pvu3g1855 1218 Gene3D - 116 286 - -
Pvu3g1855 1218 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Pvu3g1855 1218 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Pvu3g1855 1218 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Pvu3g1855 1218 SFLD Haloacid Dehalogenase 406 913 - -
Pvu3g1855 1218 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pvu3g1855 1218 PRINTS P-type cation-transporting ATPase superfamily signature 748 758 - -
Pvu3g1855 1218 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Pvu3g1855 1218 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Pvu3g1855 1218 SUPERFAMILY HAD-like 419 917 IPR036412 -
Pvu3g1855 1218 Gene3D - 537 676 IPR023299 GO:0000166
Pvu3g1855 1218 MobiDBLite consensus disorder prediction 1193 1210 - -
Pvu3g1855 1218 Gene3D - 694 902 IPR023214 -
Pvu3g1855 1218 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Pvu3g1855 1218 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1855 Pvu-Chr3 39144976 39151592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1855 10 1188 Primary Pumps ATPases AT3G25610 69.882 0.0 1761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1855 K01530 K14802 gmx:100799312 2157.87