Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1839 ATGGATGCAACTCGTGTCTCTCACAGCCTTGGCGATCCCAAAATTCGTCGAGTGGGTTTCTTTGTTCCCGAATCCTCCACCACCGACTCTTGCAAGATTCTGTCGCCACGTCATCTTTCCGGGACGCTCCCGGATATGCAGACTTCCGTCGATGGCCAAGTGTCATCTCAGAGCAATGATGCCTCGGAAAACCTAAACCTTGAAACTGGCATTGAAAAGAGGGAAGAGGGAGAGAAAAAGGTTCTGAAATCGAGGTCAAAGCCGCTGAAAGAAAAAACTACTAAGGCAGAGAGACGAGCCTTGCAGGAAGCACAGAGAGCTGCTAAAGCTGCTGCTTCTAAAGATGAGGGAAGTAAGGCTGTTGCTGAAACTGGTGGAGCTGCCACGGGTAGAAGTACAAAACAGTCTTCTCAAAAGAAAGTTGGTCCTTCGTTTCCACTGGCTGCTGATAAAAAAGCAGGAGACCGTCCTTTGGATAAAGACAGGAAAAAGGATGCTCCTCCTCCACGAATGCAATTTGATGATGAAAGCCGAATGGAAAAGGCTAGAAGGCGTGCAGTAGTCAATCCAACTGAATCTAGAACCAGAGTTGAATTATTTAAGCATTTGCCTCAATATGAACATGGGACTAAGCTTTCTAATCTTGAATCAAAGTTTTTCCACCTTGGTTTAGTGCACCCTTCTGTATTTGAGGTAGGACAGCGATATTCGGCAGGGGATATATGGGGGGGTAATGCTCGTTGTGTAGCAATGCTAAGAGCACTTCAAGATGCCATTAGAGATTACTGCACAGATCATGAAAAAGCCCTTGTTAGGGATTTAACTTCAAAAATCAACAGTTATGTTTCATTCTTTACTGAATGCAGACCACTTTCTATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTCAACCTGTCTACGAATCATTCCGAGTTTGAGGCAAAAAGAACCTTGTGTTCAGATATTGACCAGTTTATAAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTCCGACATGCTTTTACAAAGATTAAGGACGGGGATGTGCTTCTCACCTATGGATTGTCGTGTGTTGTTGAGATGATTCTTTTATATGCACATGAACTTGGAAAACATTTCCGTGTTGTTGTGGTAGATTCTCAGCCAAGACTTGAAGGTCAGGTCTTGCTTCGTAGGCTAGTGGCTAAGGGTCTGAGTTGCACATATACTCATATTAATGCTGTTTCTTATATCATGCATGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTAATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGACCCAGATGCTATTGCCAGGGTTCCTGGACGAATGGATGTCAATTATCTAGATAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCACGGTTATTGTAACAGATTATGGTATGCTTCCTCCTTCAAGCGTGCCTGTAATAGTACGTGAATATCGACGAGAGCATTTGTTGATGTAG 1653 0.4265 MDATRVSHSLGDPKIRRVGFFVPESSTTDSCKILSPRHLSGTLPDMQTSVDGQVSSQSNDASENLNLETGIEKREEGEKKVLKSRSKPLKEKTTKAERRALQEAQRAAKAAASKDEGSKAVAETGGAATGRSTKQSSQKKVGPSFPLAADKKAGDRPLDKDRKKDAPPPRMQFDDESRMEKARRRAVVNPTESRTRVELFKHLPQYEHGTKLSNLESKFFHLGLVHPSVFEVGQRYSAGDIWGGNARCVAMLRALQDAIRDYCTDHEKALVRDLTSKINSYVSFFTECRPLSMSMGNAIRFVKSRIVNLSTNHSEFEAKRTLCSDIDQFINEKIILADKVIVRHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKHFRVVVVDSQPRLEGQVLLRRLVAKGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFNERVLLDSICSNELGDPDAIARVPGRMDVNYLDNWASEDNLRLLNLMYDATPSDYVTVIVTDYGMLPPSSVPVIVREYRREHLLM* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1839 550 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 55 550 - -
Pvu3g1839 550 MobiDBLite consensus disorder prediction 152 190 - -
Pvu3g1839 550 MobiDBLite consensus disorder prediction 67 113 - -
Pvu3g1839 550 MobiDBLite consensus disorder prediction 128 142 - -
Pvu3g1839 550 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 55 550 - -
Pvu3g1839 550 MobiDBLite consensus disorder prediction 26 66 - -
Pvu3g1839 550 Pfam Initiation factor 2 subunit family 243 533 IPR000649 GO:0044237
Pvu3g1839 550 SUPERFAMILY NagB/RpiA/CoA transferase-like 225 543 IPR037171 -
Pvu3g1839 550 MobiDBLite consensus disorder prediction 26 190 - -
Pvu3g1839 550 Gene3D - 337 543 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1839 Pvu-Chr3 39006859 39011238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1839 65 550 Eukaryotic Initiation Factors Gene Family AT5G38640 65.173 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1839 K03680 - gmx:100795256 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1839 3 39006859 39011238 Pvu3g1839 3 39006859 39011238 ECH