Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1832 ATGAAGAAGGGAGAGAAAGTGATTTTAAGTGTGAAGCCTCAATTGAAAGTAATTGGTAAGCTACAAGATGGTACTTTGTTTTTGAAGAAGGGTCATGATGATGAAGGGGAGCTGTTTGAATTCAAAACTGATAAGGCTATTTTGATTATGAAGAAGGGTGAGGTGACATTGTTAACTGTTGCGCCCGAGTATGGTTTTGGCTCATCAGAGTCTCAACAAGAACTTGTTGTGTTCCTTCTAACTCCACTTTGTATTATGAGGTTGAGCTAG 270 0.3889 MKKGEKVILSVKPQLKVIGKLQDGTLFLKKGHDDEGELFEFKTDKAILIMKKGEVTLLTVAPEYGFGSSESQQELVVFLLTPLCIMRLS* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1832 89 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 15 72 - -
Pvu3g1832 89 SUPERFAMILY FKBP-like 17 73 - -
Pvu3g1832 89 Gene3D - 14 80 IPR046357 GO:0003755
Pvu3g1832 89 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 15 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1832 Pvu-Chr3 38898196 38898707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1832 14 77 Calmodulin-binding Proteins AT3G25230 60.274 1.84e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1832 K09571 - pvu:PHAVU_003G177200g 175.637