Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1806 ATGGCGTTTGATCAGAATTCCGTTCCGTTGGATCTCCGGCCGTTGAATGTAGCCGCCGCGGTGGCGGAGGAGCCGATCATTTCGCCGGCTACCATCACGCCGCCGACTCCGAATTCTGTCGGCGAGCTTTTTTACCAGCCGGCGTCCTCCGCCGCCTGTACAACGTGGTGCGTCCGCCCAATTACGCATGCCAACGTGAGCCCTGCCGCGGCGTATGGGTTTAACTACAGCGGTTCCAGCTTTGGCAATCGCGTCGTGGCTGGGAATGCTATGAGTTTGGGGAAGCTTGTGGGGTGTAATGGATTGGACAAGGCCTGCAATGATGCGAATGGTTTTGGTTATGGTGTTGGCGGGGTTCGGGGCAGCAGAGTGGTCGGGAGTGGCAGCAATCAGGGTGGCAGGGGCGAGGGTGGTGGCAACAGTGATGATTCGGCGTCCGGGAGGAAGGTGAAGTTTCTCTGCAGTTTTGGTGGGAAGATATTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGGGGGCAAACAAGGATTATTAGTGTTACGAAGGATGTGAGTTTCAATGATTTGGTGCAGAAGATGGTTGACACTTATGGGCAGGCCGTGGTTATCAAGTATCAGCTTCCCGAGGAAGATCTTGATGCCTTGGTGTCCGTGTCGTGTCCCGATGATGTTGAGAATATGATGGAAGAGTATGATAAGTTGGTTGAGAGATCACCCGATGGTTCTGCAAAACTAAGAGTTTTTCTGTTTTCTGTTTCGGAGACCGAAGTTTCTAGTGGGGTGCAGTTGGGGGACTTGCAGGATACTGGGCAGAAATATTTCGATGCTGTGAATGGAATTGGTACGACAGAGGCAACTGGGTTTGCAGGTGGGATCAATCGGAAGGAGAGTGTTGCAAGTGCGGCCTCAACCCAGAATTCGGATTTTAGCGGGCCTGAGACTTTTGATAGTTCAATTACTGGTCAAGGGGATGTCATTGTGCCCTTCTCATCACCTAAAGAGAATGTGGCAGCAGCTTCCCCAGACTCAAGTGCTAATATGGGGATTTCAGATTCCAGTGCACCGGTTTACTCGGGTGTTTGTGCAGTTCCGGTTGCCATGCCTGTGGCTAGGGCTAGTCCAACCCCATCCCACAATACTTATTTTCAGAATGAGGTTGAGTTAGAAAGGTCTGTCCCTGTTGCTTTGCCCCAGCAGCCTTTTGGATTTCAGCAAGCTGGAATAGAAGTTCCAGCCCCTTCATCTTATTTGCAGCCTTGGGTTGATCCTAGCCAGGAGGTTATGAACCATACAGACTTTGTCCAGGTTACTTCACAGATGAGGTTCACAAACCCTCAGCTTGTAGGAACGACTGGGCCTGGCTTGATGCAACAGCAGTTTTCTGATAATACTCCCGGCTTAGCCTTCCATCATCAGGTCATCCCTGGGGTACAAATGCCTGTGGCTCCACAATCTTCTCACGCTGGTGTGAGACCGAATGTTATTCAGTCACAATCGTTCGTGCAATCACAGCAACATCTTTTGGATCAATACCATGATGATAATACATCAGGGGTAAGGATTATCCAACTTCCTGCCGAACGTAGCTACAACACTTACCAGGTTCCAGTGAATCAAGTACCATCTGTCATAGTTGGAGGCAATTATAGCTGGGTTCAGGTTCCTTCACAAGAGCGCGTTGTTATCTCTGATGGACTATTACCTCAACAACAGGTAACGACCCCTGAGAAATTCCAAAGAACCGAGGAATGTTCTCTGTGTCAGACAAAACTACCTCATGCACATTCAGATCCTGTAGTTCAGGATGAGCGTAGTAGTGGTGCAGGTCCTGTTCCTGATTCAACCCCAAGTCACTATAGCTTCCCAATGGAGGACAACATAAAAGCTCAAGCACCAAATAGGATTACGCCAGTGGTGATGTCGCCGTTGAAGGAAGGCCTTGCTGAACAAGGGGCTGGGACCAGACCCTGTGTCGTTGGCAAACTGGAACCTCCTGATGGAGTTCATCATACTGAGACCACTGGGCTTTCTCATAATATTGAGCCACAGCCAGAAGAATCTGATCATCCTGGGAATTCATTTTTCCAGGAAAAAATTGCATTCAAAGGTAGAAATCAATCTCCAAATGATGAGCTCATGGGAACAGCAGCACTGTCTTATTTAGATGATGTTGGCGACCAACACATAGTACCAGTTGAAAACTGGGTTAAACAGGATGTGCTTATTAACAAACCTATGAATAGTGATATGTCTGCAGTTGATGGAACATCTATACGAACTTCAGAGTGCACGGTTCAAGGATCTCCAAATGAATATACTGATGAACGTAGTGGGGTTGTTTCTAAATCAGATGAGATAGATAATTGGATTAGACAAGACCATCTAAAACCTATTGATGGAAGGATGGACACCTTCAAGATACACAATTCTGATGCTTATGTAAGTAATGACTACTCTTTTCTGCCAGCTGATATACCCAGTGGGAATGATAATTTAGGTTACAACACTCAGAAATCTGCAGAGGAAGAGGTCATTCTGGATAACAACTTTGGCAGGTCAAAGCTGATAGTTGATGCAAATCAAAATAAGATGGCAGGTGTGCTGCCTTGTTCTTCTATGGAAATTTCATACAGGAAAAATTCCAGGTCAGGGGAACACAATGAGGCCACACAATCCCCTGTTTGGGGCATTCCTGTCTCAAATCCTCAATCGAATATTGGAAACCCCCACACCAACGATCCAGCACTGTCTTCATCATCCCCATCTGTCAGGTTTGAAGATGTGCAGGATACTCCGAACTCACTTTTCAGCAATCAGGATCCATGGAATATACAGCATGGTACCTTCCTTCCACCTGCAAGACCTAGCAATGCTTCATTGAAGAAAGAATCCTATTCTTGTCAGGATCCCTTTCGTGAGGATCCTGGCCACTTTGGAGAACAAAGTTTAGAAGAAGCCCAGTTGGATGATAGCCTCTATCAGTCATTCAAACAAAATTTAACTTTAGAACATGGTCGATCTGCCAAAGGTTCAGCAGAAGACCAACAACTCCAAGCTGTTGCTGAAAATGTAGCAGCTTCTGTTTTGCACTCAAGAAATCCTTCAAATTCTGACTTGCATTCCAGAGATGTTTCCTGCTGTGATAACATTGAGGATGGCAGTGTTCAAAATAATCTAATGGATGTAAATTGTGGACATAAAACTCAGGATGTCACGAGCAAGCAACTAGAAAAGACAAATTTTGGATTTCCAGCATCAGGTTTTGGAAAATTACAGGTTATAAAGAACTGTGATCTTGAAGAACAGAAAGAACTCGGTTCTGGTACATTTGGGACCGTCTATCATGGAAAATGGAGGGGCACTGATGTTGCAATCAAGCGCATTACTGATAGGTGTTTTGCGGGAAAACCTTCAGAGCAGGAGCGCATGAGAAATGACTTCTGGAGTGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTACGGTGTTGTGCTTGATGGTCCAGGGGGTTCTGTGGCAACAGTTACTGAATATATGGTTAACGGTTCTTTAAGAAACGCATTGCAGAAGAGTGAGAGGAATCCTGACAAGCGCAAGCGACTTTTGATTGCAATGGACGTGGCCTTTGGCATGGAGTACCTACATGGAAAAAATATTGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTTAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGAGACTTGGGTCTGTCCAAAGTAAAATGTCAGACACTGATATCTGGTGGGGTGAGAGGAACTCTGCCGTGGATGGCTCCGGAACTGCTGAACGGAAGCAGCAGCCTTGTTTCAGAGAAGGTTGACGTATTTTCATTTGGCATTGTGATGTGGGAACTCTTGACTGGGGAGGAGCCATATGCTGACTTGCACTATGGTGCTATTATTGGTGGTATAGTGAGCAACACTTTGCGTCCTCCTGTTCCAGAATCTTGTGATCCAGAATGGACATTGTTGATGGAGAGGTGCTGGTCATCAGAACCATCAGAGAGACCAACCTTCACTGAGATTGCCAATGAATTGCGTTCTATAGCGGCCAAGATCTCTCCCAAAGGACAAAACCAACAGCTGCAACACTCTCCATTGCACACTCAACTCCACAAATGA 4173 0.4642 MAFDQNSVPLDLRPLNVAAAVAEEPIISPATITPPTPNSVGELFYQPASSAACTTWCVRPITHANVSPAAAYGFNYSGSSFGNRVVAGNAMSLGKLVGCNGLDKACNDANGFGYGVGGVRGSRVVGSGSNQGGRGEGGGNSDDSASGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVTKDVSFNDLVQKMVDTYGQAVVIKYQLPEEDLDALVSVSCPDDVENMMEEYDKLVERSPDGSAKLRVFLFSVSETEVSSGVQLGDLQDTGQKYFDAVNGIGTTEATGFAGGINRKESVASAASTQNSDFSGPETFDSSITGQGDVIVPFSSPKENVAAASPDSSANMGISDSSAPVYSGVCAVPVAMPVARASPTPSHNTYFQNEVELERSVPVALPQQPFGFQQAGIEVPAPSSYLQPWVDPSQEVMNHTDFVQVTSQMRFTNPQLVGTTGPGLMQQQFSDNTPGLAFHHQVIPGVQMPVAPQSSHAGVRPNVIQSQSFVQSQQHLLDQYHDDNTSGVRIIQLPAERSYNTYQVPVNQVPSVIVGGNYSWVQVPSQERVVISDGLLPQQQVTTPEKFQRTEECSLCQTKLPHAHSDPVVQDERSSGAGPVPDSTPSHYSFPMEDNIKAQAPNRITPVVMSPLKEGLAEQGAGTRPCVVGKLEPPDGVHHTETTGLSHNIEPQPEESDHPGNSFFQEKIAFKGRNQSPNDELMGTAALSYLDDVGDQHIVPVENWVKQDVLINKPMNSDMSAVDGTSIRTSECTVQGSPNEYTDERSGVVSKSDEIDNWIRQDHLKPIDGRMDTFKIHNSDAYVSNDYSFLPADIPSGNDNLGYNTQKSAEEEVILDNNFGRSKLIVDANQNKMAGVLPCSSMEISYRKNSRSGEHNEATQSPVWGIPVSNPQSNIGNPHTNDPALSSSSPSVRFEDVQDTPNSLFSNQDPWNIQHGTFLPPARPSNASLKKESYSCQDPFREDPGHFGEQSLEEAQLDDSLYQSFKQNLTLEHGRSAKGSAEDQQLQAVAENVAASVLHSRNPSNSDLHSRDVSCCDNIEDGSVQNNLMDVNCGHKTQDVTSKQLEKTNFGFPASGFGKLQVIKNCDLEEQKELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRNDFWSEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKSERNPDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWTLLMERCWSSEPSERPTFTEIANELRSIAAKISPKGQNQQLQHSPLHTQLHK* 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1806 1390 ProSiteProfiles Protein kinase domain profile. 1100 1366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1806 1390 SMART serkin_6 1100 1366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1806 1390 PANTHER SERINE-THREONINE PROTEIN KINASE 122 914 - -
Pvu3g1806 1390 PANTHER SERINE-THREONINE PROTEIN KINASE 916 1370 - -
Pvu3g1806 1390 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 916 1370 - -
Pvu3g1806 1390 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 122 914 - -
Pvu3g1806 1390 MobiDBLite consensus disorder prediction 880 930 - -
Pvu3g1806 1390 Gene3D - 170 252 - -
Pvu3g1806 1390 PRINTS Tyrosine kinase catalytic domain signature 1182 1195 IPR001245 GO:0004672|GO:0006468
Pvu3g1806 1390 PRINTS Tyrosine kinase catalytic domain signature 1219 1237 IPR001245 GO:0004672|GO:0006468
Pvu3g1806 1390 PRINTS Tyrosine kinase catalytic domain signature 1290 1312 IPR001245 GO:0004672|GO:0006468
Pvu3g1806 1390 PRINTS Tyrosine kinase catalytic domain signature 1334 1356 IPR001245 GO:0004672|GO:0006468
Pvu3g1806 1390 CDD STKc_MAP3K-like 1106 1363 - -
Pvu3g1806 1390 MobiDBLite consensus disorder prediction 125 145 - -
Pvu3g1806 1390 SUPERFAMILY Protein kinase-like (PK-like) 1093 1362 IPR011009 -
Pvu3g1806 1390 ProSitePatterns Protein kinases ATP-binding region signature. 1106 1137 IPR017441 GO:0005524
Pvu3g1806 1390 CDD PB1_UP2 153 251 - -
Pvu3g1806 1390 SMART PB1_new 164 253 IPR000270 GO:0005515
Pvu3g1806 1390 MobiDBLite consensus disorder prediction 887 930 - -
Pvu3g1806 1390 Pfam PB1 domain 169 252 IPR000270 GO:0005515
Pvu3g1806 1390 Gene3D Transferase(Phosphotransferase) domain 1 1188 1389 - -
Pvu3g1806 1390 MobiDBLite consensus disorder prediction 595 619 - -
Pvu3g1806 1390 Gene3D Phosphorylase Kinase; domain 1 1093 1187 - -
Pvu3g1806 1390 SUPERFAMILY CAD & PB1 domains 165 256 - -
Pvu3g1806 1390 Pfam Protein tyrosine and serine/threonine kinase 1101 1363 IPR001245 GO:0004672|GO:0006468
Pvu3g1806 1390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1225 1237 IPR008271 GO:0004672|GO:0006468
Pvu3g1806 1390 MobiDBLite consensus disorder prediction 1371 1390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1806 Pvu-Chr3 38547826 38555256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1806 116 637 MAP Kinase Kinase Kinase AT3G46920 37.381 1.04e-80 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pvu3g1806 PK_Tyr_Ser-Thr 7.9e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1806 - - gmx:100819234 2002.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1806 3 38547826 38555256 Pvu9g2163 9 30984629 30991137 PCT