Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1799 ATGTGTGTGCAAGAGGGTGAACAAGTTGGTGAGGATATAGAGAAGAGCGTTGATAACAGAAGGGTGTCATGGCCATTACATTGTGATCTCTTGCAAGCCCACATGGACAACAGGGAAAAAGACTCTTCCTTTAGAGCTCCCACTGACCAGATCAGTGTTGCAAATTCATTTCCTCTGGAAAGCATATGTGAGGATACAGAAACTGTGGACAAAAAACAGAACCTGATGAACTTTGTCCCTACTCTTCGGTCTGGAGAGTGGTGTTATATTGGAGAGCGCACTTCCATGGAGGATACCCACATATGCATTGGAGACTTGGCCAAAAAATTTGGCAATAACGTACTTTCCGAGGAAGCTATTTCTTTTATGGTATTTGACGGACATGGAGGGAAGAGTGCTGCACAATTCGTTCGTGATCATCTACCACGGGTGATTGTTGAGGATGCTGACTTTCCTTTGGAACTTGAGAAGGTTGTCACAAGGTCATTTTTGGAGACTGATGCTGAGTTTGCAAGAACATGTTCTATTGAGTCTTCCCTGTCTTCTGGCACAACTGCATTGACTGCCATTATATTTGGAAGGTCTTTACTTGTAGCCAATGCCGGAGACTGCCGCGCAGTGTTATCTCGTGGTGGACGGGCCATAGAAATGTCCAAAGATCACAGGCCGTTGTGCATGAAAGAAAGGAAGAGGATTGAGTCTGTAGGTGGATACATAGATGATGGTTACCTGAATGGGCAGTTAGGTGTGACTCGTGCTCTAGGCGACTGGCATCTTGAAGGAATGAAGGAAATGAATGGAAAGGATGGACCATTGAGTGCTGAGCCTGAACTTAAATTGCTGACATTGACCAAAGAAGATGAATTTTTTATAATTGGCAGTGATGGAATATGGGATGTTTTTCGCAGCCAGAACGCAGTGGACTTTGCTCGAAGAAGGCTTCAAGAACACAATGACGTGAAGCAGTGTTGCAAAGAGATAATAGAAGAAGCAATAAAGAGAGAAGCAACAGACAACTTGACAGTGGTGATGGTGTGTTTTCACTCAGAACCACCACCTCCTGTGGTAGTAGAAAGGCCTAGAGTCAGAAGAAGCATATCTGCTGAGGGACTTCAAAATCTTAAATGCTTGCTAGAAGGATAG 1143 0.4427 MCVQEGEQVGEDIEKSVDNRRVSWPLHCDLLQAHMDNREKDSSFRAPTDQISVANSFPLESICEDTETVDKKQNLMNFVPTLRSGEWCYIGERTSMEDTHICIGDLAKKFGNNVLSEEAISFMVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLETDAEFARTCSIESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRGGRAIEMSKDHRPLCMKERKRIESVGGYIDDGYLNGQLGVTRALGDWHLEGMKEMNGKDGPLSAEPELKLLTLTKEDEFFIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKEIIEEAIKREATDNLTVVMVCFHSEPPPPVVVERPRVRRSISAEGLQNLKCLLEG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1799 380 Gene3D - 63 351 IPR036457 -
Pvu3g1799 380 PANTHER PROTEIN PHOSPHATASE 2C 1 368 IPR015655 GO:0004722|GO:0006470
Pvu3g1799 380 CDD PP2Cc 91 347 IPR001932 -
Pvu3g1799 380 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 368 - -
Pvu3g1799 380 SMART PP2C_4 73 345 IPR001932 -
Pvu3g1799 380 ProSiteProfiles PPM-type phosphatase domain profile. 83 347 IPR001932 -
Pvu3g1799 380 SUPERFAMILY PP2C-like 74 349 IPR036457 -
Pvu3g1799 380 Pfam Protein phosphatase 2C 92 339 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1799 Pvu-Chr3 38505425 38508282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1799 51 380 PP2C-type Phosphatase Gene Family AT2G25620 57.910 6.55e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pvu3g1799 PP2C 5.2e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1799 K14803 - gmx:100820303 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1799 3 38505425 38508282 Pvu3g1799 3 38505425 38508282 ECH
Pvu3g1799 3 38505425 38508282 Pvu9g2167 9 31032275 31035731 PCT