Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1792 ATGATCATGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTTGTGGGGTGCTCTTACCATGAGAACGCTAAAAAGAATGAGAAGAATGTCTTCTGCTTAGATTGTTGCACCAGTATTTGTCCTCACTGTCTGCCATCTCATCGCTTCCACAGGCTTCTTCAGATTCGCCGTTACGTTTATCATGATGTTGTTAGGATGGAAGATCTTCAGAAACTCATAGACTGCTCCAACGTTCAGGCCTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAAAAGAGACCTCAAAACCGGCAATTCAAAGGGTCAGGAAACTACTGCACCTCCTGTGATAGAAGTCTTCAAGAGCCTTTTATCCATTGCTCTCTTGGATGCAAGGTTGATTTTGTGCTGAAACACTATAAGGATCTCTCTCCATACTTGAGAACATGCAACTCCCTACAACTAAGTCCTGACTTTCTGATCCCACAAGAGATGGGGGATGAGGAGATGACTCGTTCAACGGTTGTGGATTGTGATGAGCCAATGAGTTCATGTTCAGGGTCATCAGGGTCTGAGAACAACATGAGCATGTCTTGCACAGAGATTGTAAGGAAGAGGAGGAGTGGATGGAGCACTGTGTGTGCAAAATTCATGGCCAATAGCAATAACAAGGTTTCGGATGAAGATATGGCCACCAGCATGAGTAGAAGAAAAGGGATCCCTCATAGATCCCCACTGTGTTAG 744 0.4449 MIMGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVFCLDCCTSICPHCLPSHRFHRLLQIRRYVYHDVVRMEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQEMGDEEMTRSTVVDCDEPMSSCSGSSGSENNMSMSCTEIVRKRRSGWSTVCAKFMANSNNKVSDEDMATSMSRRKGIPHRSPLC* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1792 247 ProSiteProfiles Zinc finger B-box type profile. 23 61 IPR000315 GO:0008270
Pvu3g1792 247 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 247 - -
Pvu3g1792 247 Pfam PLATZ transcription factor 62 133 IPR006734 -
Pvu3g1792 247 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 247 - -
Pvu3g1792 247 MobiDBLite consensus disorder prediction 228 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1792 Pvu-Chr3 38424473 38426629 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu3g1792 PLATZ 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1792 - - gmx:100781564 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1792 3 38424473 38426629 Pvu3g1792 3 38424473 38426629 ECH