Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1789 ATGTTGAGAGTGAAGGGAGGGAAAAGGCCACCTTGGGTGGGACTTGGAGCTGCAGTGTGGGTTCAGATTTGTTCAGGAAATGGCTACACTTTTCCTCTCTACTCTCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAAATCACCCTGCTTGGTGTTGCCAATGATATTGGTGAGAATGTTGGCATTCTTCCGGGTCTTGCCTGCAACAAGTTCCCCCCTTGGCTCATTCTTCTCATCGGCGGTCTCTTATCATTCCTTGGTTTTGGTTTTCTCTGGCTTGCTATTTCTAAAACATTTGATTCCGTTCCTTTCATACTGCTATGGCTTGCACTTGCTGTAGCTACCAACAGCTGTGCATGGTTATCTACTGCTGTTCTAGTCACCAACATGAGAAATTTTCCTGTCAGTAGAGGCACAGTTGCAGGAGTCCTGAAAGGTTATTCGGGACTCAGTGCTGCAGTTTTTACGGAAATTTACAGCATGGGTTTTCATAATTCTTCACCCAACTTCCTGTTGTTCCTTGCCATTGGTATTCCTGTTTTATGCTTCAGTACCATGGTTCTTGTTCGGCCTTGCACTCCGGCTTCTGGTGAAGATTCTTCTGAAAACAGGCATTTTCTGTTCATCCAAGGTTTTAGTGCAGCCTTGGGTTTATACTTACTTGCAACAACAATACTTGACAACTTTGTCTCCACGAGTGATACGGTATCATATGTTATACTGGCTGTGATGATTCTCCTTCTCTTGGCTCCTCTTGCTATCCCTATAAAGATGACACTGTGTCCCAGAAAAGCATCTATATCAGAAACACCAGAGCAACATGTTGAATCTTCCGACTTTCTGGTTGTCGATGGCAAGGTGGACAACATAGAGCCCTTGCTATCATCTTCATCAACCAGTGGCCTTGAAGGTTTTAACGATGTGGATGGTTCAGCGGAGGTGGCCATGCTTCTTGCTGAGGGTGAGGGGGCAGTGAGGAAGAAGAGAAGGCCCAAGAGAGGGGAAGATTTTAAGTTCACTGAGGCTCTCGTAAAGGCAGATTTCTGGCTACTGTTTTTTGTTTACTTTGTTGGTGTTGGAACCGGGGTTACTGTTCTGAATAATTTGGCTCAAATAGGCATTGCACAAGGTATTGAAGATACCACAATTTTGCTGTCACTATTCAGCTTTTTCAATTTTGTGGGTCGGCTGGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACTATTCCAAGGACAATTTGGATGACATGCACGCAGATGATTATGATGTTCTTGTACCTTGTGTTTGCCTATGCTATCAATGGAACCCTTTATCCTGCAATTGCAGTTCTTGGTATCTGCTATGGCGTGCAATTTTCCATAGTGATTCCCACTGTTTCGGAGCTTTTTGGTTTGAAACACTTCGGTTTGTTGAGCAACTTCATGGGATTGGGGAATCCACTTGGTGCATTACTTTTCTCGGCTCTTCTAGCAGGACACATATATGATAATGAGGCAGCAAAACAACATGGTGAAGGTCTCATTGCTTCAAGTGTTGCATGTATGGGTCCAAGTTGTTTTCAGCTAACCTTTTTTACTCTGGCTGGTGTGTGTGTTGTGGGTACCCTCTCCAGTATTATCTTGACTATAAGAATTAAGCCCGTTTACCAAATGCTTTATTCCGGGGGTTCTTTCAAGCTACCTCAAACTCCAGGCCACTAA 1716 0.4406 MLRVKGGKRPPWVGLGAAVWVQICSGNGYTFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILLIGGLLSFLGFGFLWLAISKTFDSVPFILLWLALAVATNSCAWLSTAVLVTNMRNFPVSRGTVAGVLKGYSGLSAAVFTEIYSMGFHNSSPNFLLFLAIGIPVLCFSTMVLVRPCTPASGEDSSENRHFLFIQGFSAALGLYLLATTILDNFVSTSDTVSYVILAVMILLLLAPLAIPIKMTLCPRKASISETPEQHVESSDFLVVDGKVDNIEPLLSSSSTSGLEGFNDVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGIEDTTILLSLFSFFNFVGRLGGGVVSEHFVRTKTIPRTIWMTCTQMIMMFLYLVFAYAINGTLYPAIAVLGICYGVQFSIVIPTVSELFGLKHFGLLSNFMGLGNPLGALLFSALLAGHIYDNEAAKQHGEGLIASSVACMGPSCFQLTFFTLAGVCVVGTLSSIILTIRIKPVYQMLYSGGSFKLPQTPGH* 572
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1789 571 CDD MFS_Mch1p_like 10 540 - -
Pvu3g1789 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Pvu3g1789 571 Pfam Nodulin-like 11 258 IPR010658 -
Pvu3g1789 571 Gene3D MFS general substrate transporter like domains 347 554 IPR036259 -
Pvu3g1789 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 569 - -
Pvu3g1789 571 SUPERFAMILY MFS general substrate transporter 211 552 IPR036259 -
Pvu3g1789 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 569 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu3g1789 Pvu-Chr3 38384650 38387538 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1789 2 571 Nodulin-like Gene Family AT1G80530 57.517 0.0 645
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1789 3 38384650 38387538 Pvu3g1789 3 38384650 38387538 ECH
Pvu3g1789 3 38384650 38387538 Pvu9g2185 9 31374935 31378145 PCT