Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1761 ATGGCTATTTCTGCGTTATTCTTGGTTCTGTTGCTGCAATTGTCAACAATATTTTGTTCTGAGGTTGTCTTACAGTCAAAGGATTGTGGCACTGATTGGGTGGCACATTCATATTCTAGTCATGGTCAGGAGCTTTTCTACATAAACGGCAATGTGGTGAACAAGGTTGCTTTCTGTGAGGCTCTCCAATTGTATACTGAAAAGGGGTGTGATGTGAAGGACTACTTTGAAAGTGTCAAATGTGTGACGGATGTTTCTTTTGTGGATTTTCCTTTAAAGGCAGGGAGGAAACTTCTGAAAACGGATTCAAATAGTGAATCCAAATCGCAAGGAGATTCTAAGCCTCTGTCAGCCCACGTGGTTGGTATTTCTGCAGGGGGAGCTTTGTTTGTATGTTGTCTTGTTCTTTGTCCTTGTTTCTTTAAGAGAAGGAAAACAACTTCTCATGCTGTTCTGAATAAGGAACCCAATTCAATGGATTCGGTTTCCTCCTTCAAAGCCTCCGTTACTGACAAGATTCCGGCCAGTCCACTACGGGTGCCAGCTAGTCCGTCCAGATTCTCAATGTCTCCAAAACTCAGTAGGCTTCAATCACTGCATCTCAATCTGAACCAAGTTGCAAGAGCTACTGATAACTTCTCAGAAACATTGCAAATAGGAGAAGGGGGTTTTGGTACTGTATACAAGGCCAAGTTGGAAGATGGCCTGGTTGTGGCTGTAAAACGTGCAAAAAAGGAACATTTTGATAGTTTGAGAACAGAATTCAGCAATGAAATTCAACTTCTGGCCAAAACTGATCATCGAAACCTGGTGAAGCTACTAGGTTATATTGATAAAGGAAATGAACGCCTTCTTATTACAGAGTTTGTGCCAAATGGTAACCTTAGAGAACATTTGGATGGTATGCGTGGAAAAACACTGGACTTCAATCAGCGACTTGAAATTGCAAATGATGTTGCTCATGGCTTGACCTATCTGCATCAGTATGCAGAAAAACAAATTATCCATCGAGACGTGAAATCATCCAACATTCTTCTGACAGAACGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAAGCTAGGGCCTGTAAACGCTGATCAGACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCCGAGTATATGAAAACATACCAACTCACTCCCAAAAGTGACGTTTATTCATTTGGAATCTTGCTTATAGAAATTGTGTCTGGCCGCCGTCCCGTTGAGATGAAGAAAACTGTTGAAGAGCGTGTTACACTTAGATGGGCCATCAGGAAGTACAACGAAGGAATTGTGGTGGAAATGGTGGATCCTTTAATGGAAGAAGCAGTAAACACAGATGTTCTCATGAAGATGTTTGATTTGGCATTTCAATGTGCAGCACCCATTAGAACAGAGAGACCTGACATGAAATCAGTGAGCGAGCAGTTGTGGGCAATAAGGGCAGATTACCTCAAGAGTGCAGGGAGAGCATAA 1500 0.4207 MAISALFLVLLLQLSTIFCSEVVLQSKDCGTDWVAHSYSSHGQELFYINGNVVNKVAFCEALQLYTEKGCDVKDYFESVKCVTDVSFVDFPLKAGRKLLKTDSNSESKSQGDSKPLSAHVVGISAGGALFVCCLVLCPCFFKRRKTTSHAVLNKEPNSMDSVSSFKASVTDKIPASPLRVPASPSRFSMSPKLSRLQSLHLNLNQVARATDNFSETLQIGEGGFGTVYKAKLEDGLVVAVKRAKKEHFDSLRTEFSNEIQLLAKTDHRNLVKLLGYIDKGNERLLITEFVPNGNLREHLDGMRGKTLDFNQRLEIANDVAHGLTYLHQYAEKQIIHRDVKSSNILLTERMRAKVADFGFAKLGPVNADQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLIEIVSGRRPVEMKKTVEERVTLRWAIRKYNEGIVVEMVDPLMEEAVNTDVLMKMFDLAFQCAAPIRTERPDMKSVSEQLWAIRADYLKSAGRA* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1761 499 ProSitePatterns Protein kinases ATP-binding region signature. 219 245 IPR017441 GO:0005524
Pvu3g1761 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Pvu3g1761 499 SMART serkin_6 213 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1761 499 Gene3D Phosphorylase Kinase; domain 1 182 289 - -
Pvu3g1761 499 Pfam Protein tyrosine and serine/threonine kinase 218 485 IPR001245 GO:0004672|GO:0006468
Pvu3g1761 499 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 8 494 - -
Pvu3g1761 499 CDD STKc_IRAK 219 485 - -
Pvu3g1761 499 ProSiteProfiles Protein kinase domain profile. 213 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1761 499 PANTHER OS07G0166700 PROTEIN 8 494 IPR045272 GO:0004714|GO:0006468
Pvu3g1761 499 Gene3D Transferase(Phosphotransferase) domain 1 290 496 - -
Pvu3g1761 499 SUPERFAMILY Protein kinase-like (PK-like) 195 488 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1761 Pvu-Chr3 38106370 38110970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1761 198 488 Receptor kinase-like Gene Family AT5G59700 45.017 1.26e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pvu3g1761 PK_Tyr_Ser-Thr 5.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1761 - - gmx:100798260 843.958