Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1739 ATGAAAGTTGTGAGCATGGAGACAGAGAAGAAGTGTGGTTGCTGGTCTGTCCTTAAACGCGGTGTTAGAGCAACCGAGACAAGATACCTGAATGCTAGTAATCGAGAACTTTGTCCTCCCCTTGAAGCTCGATTATCTTCTGATAACCCTGATCCCCCACCCCAGGAGACCAAGGCTGCATGCCAGCTTCTTCAATTTTCATTTCAAGAACTTAAAGCTGCAACTGGAAATTTCAGACCTGATAGCATTCTTGGGGAAGGTGGCTTTGGTTATGTTTTCAAAGGATGGATTGAGGAAGATGGAACCTCGCCAGCTAAACCTGGGTCAGGGATTACAGTGGCTGTCAAAAGCTTGAAGCCAGATGGCCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGACAGCTTCACCATCATAACCTTGTGAAACTTATCGGTTACTGCATTGAAGATGATCAGCGGCTTCTTGTCTATGAGTTTATGACCCGTGGAAGTCTAGAAAATCATCTATTCAGAAGAACCGTACCCCTCCCGTGGTCCAACAGAGTTAAGATAGCCCTTGGTGCAGCAAAAGGATTGGCCTTCCTCCATAATGGTCCAGAACCAGTCATTTATAGAGATTTTAAGACATCTAACATTTTGCTTGATACGGAGTATAATGCAAAGCTTTCAGATTTTGGTCTAGCAAAAGCAGGACCTCAAGGAGACAAAACACATGTTTCTACCAGAGTAGTTGGAACTTATGGTTATGCTGCTCCAGAATATGTCATGACAGGACACTTGACTGCTAAAAGTGATGTTTATAGCTTTGGAGTTGTGTTACTTGAGATACTAACAGGAAGAAGATCAATGGACAAGAAGCGCCCTAGTGGGGAACAAAATCTTGTTTCTTGGGCTAGGCCATACTTAGCTGACAAGCGAAAGCTCTACCAGCTTGTGGATCCTCGCCTCGAGCTAAATTATTCTCTAAAAGGAGTGCAGAAGATTTCCCAGTTAGCTTATAGTTGCCTCAGTAGAGACCCTAAATCTCGCCCCAACATGGATGAAGTTGTGAAAGCGCTTACTCCATTGCAGGAGCTTAATGACCTTGCAATTTTGTCTTATCACACTCGCTTGTCTCAACAAGGGAGACGGAAGAAGAAAGATGGAACTCCACACATTACATACACACAATCCAAGAGCATGAGGGCCTCTCCCTTGAATACCAGCAAGCAGCATCGATGA 1233 0.4453 MKVVSMETEKKCGCWSVLKRGVRATETRYLNASNRELCPPLEARLSSDNPDPPPQETKAACQLLQFSFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTSPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHHNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKSRPNMDEVVKALTPLQELNDLAILSYHTRLSQQGRRKKKDGTPHITYTQSKSMRASPLNTSKQHR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1739 410 CDD STKc_IRAK 84 360 - -
Pvu3g1739 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pvu3g1739 410 MobiDBLite consensus disorder prediction 390 410 - -
Pvu3g1739 410 PANTHER OS01G0588500 PROTEIN-RELATED 55 381 - -
Pvu3g1739 410 Gene3D Phosphorylase Kinase; domain 1 54 163 - -
Pvu3g1739 410 MobiDBLite consensus disorder prediction 374 410 - -
Pvu3g1739 410 ProSitePatterns Protein kinases ATP-binding region signature. 84 116 IPR017441 GO:0005524
Pvu3g1739 410 Gene3D Transferase(Phosphotransferase) domain 1 164 375 - -
Pvu3g1739 410 Pfam Protein tyrosine and serine/threonine kinase 82 357 IPR001245 GO:0004672|GO:0006468
Pvu3g1739 410 ProSiteProfiles Protein kinase domain profile. 78 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1739 410 PANTHER OS01G0588500 PROTEIN 55 381 - -
Pvu3g1739 410 SUPERFAMILY Protein kinase-like (PK-like) 62 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1739 Pvu-Chr3 37758619 37762844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1739 66 372 Glycoside Hydrolase AT3G07070 54.662 3.04e-111 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu3g1739 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1739 - - gmx:100305441 791.186