Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1736 ATGGAGCTTCAACTCGGTCTCGCTCTCTCAACCAGTTCATCTCAACTACTTGACCTCAATTCTCATGCCTACGACTCTATCTTCCCTTTCCATCACAACAACAAACGTACCTTCTCCCAACTCATTCCCACGCTCTCTCTCCTCCCTCTGACGCCAAACCATCATCAAGAAGATCATCATCATCATGATAACCACACCCAATGCTCTACCATCACCAACAAGGATGATGAAGAAGATGTAGAAGGTGTGGTGGGTTGGCCACCAGTAAACTACTGGAGGAAGAAAATTCGTGTCGATAACTGCGGAGATCAAGAAGAGGTTGTGGGGAATAACGATAACATAGTATGGGTTGACCAGTGTCACGGCCATGGTTGTTCGGCCACTGGAAGGTCCAATTCTCTGTACGTGAAGGTGAAGATGGAGGGTGTTGGAATCGCACGGAAGGTCGATCTTGGCATGCACCAATCCTTTGAGACGCTCATGGAAACCTTGATGGACATGTTTGGAACAGGTCTTCAAGAATCAAACAGCTATGAATTGGCTTATCAGGACAAGGAGGGTGACTGGCTTCTCGCACAAGATGTACCTTGGAGGAGTTTCGTTGGGTGTGCAAGAAGACTGAAATTGGTGAAGAGTAGCAGCAGATGA 648 0.4738 MELQLGLALSTSSSQLLDLNSHAYDSIFPFHHNNKRTFSQLIPTLSLLPLTPNHHQEDHHHHDNHTQCSTITNKDDEEDVEGVVGWPPVNYWRKKIRVDNCGDQEEVVGNNDNIVWVDQCHGHGCSATGRSNSLYVKVKMEGVGIARKVDLGMHQSFETLMETLMDMFGTGLQESNSYELAYQDKEGDWLLAQDVPWRSFVGCARRLKLVKSSSR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1736 215 MobiDBLite consensus disorder prediction 53 76 - -
Pvu3g1736 215 SUPERFAMILY CAD & PB1 domains 124 209 - -
Pvu3g1736 215 ProSiteProfiles PB1 domain profile. 133 215 IPR000270 GO:0005515
Pvu3g1736 215 MobiDBLite consensus disorder prediction 52 76 - -
Pvu3g1736 215 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 212 IPR003311 GO:0005634|GO:0006355
Pvu3g1736 215 Gene3D - 128 215 - -
Pvu3g1736 215 Pfam AUX/IAA family 25 169 IPR033389 -
Pvu3g1736 215 Pfam AUX/IAA family 172 213 IPR033389 -
Pvu3g1736 215 PANTHER AUXIN-RESPONSIVE PROTEIN IAA20 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1736 Pvu-Chr3 37691690 37693077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1736 128 212 B3 DNA Binding Superfamily AT3G61830 33.333 2.44e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pvu3g1736 AUX_IAA 8.4e-21 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1736 K14484 - gmx:100808466 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1736 3 37691690 37693077 Pvu3g1736 3 37691690 37693077 ECH