Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1728 ATGCCACGCCCAGGGCCTAGGCCTTACGAGTGCGTGAGGAGGGCATGGCACAGCGAGCGCCACCAACCCGTTAGAGGTTCCATCATTCAGCAGATTTTCAGGGTCGTCGTTGACGCTCATAGCCCCGCGACCATGAAGAACAAGGAATGCCAGGAGAAGCTCCCCGTGGTTGTTCTCAGGGCCGAAGAAATCATGTACTCCAAAGCCAATTCCGAGGCAGAGTACTTGAATCCTGATACGCTCTGGGACCGCCTCAATGATGCCATTAACACAATCATACGGAGGGACGAGACATCCGAGACGGGAGACCTCTTGCCCCCATGCGTTGAAGCTGCACTTAACCTGGGTTGCAAGCCCGTGAGAACTTCCAGAAGTGATCGGCACAATAACCCCAGGACTTACCTCTCTCCTAAATATCAACCACCCCCTTCTGTGCCTCTCAAACCTGTTGTTGGAAATCCCTTAAACTACGGCAAGGTCCCAGCTTCTGCGGTGTCACCAATTCCTGTGCCAGATTCAACCCACCGAAGTAGCAAGCTGATGGGTTCCCCTAGCTACCACTTCTCGGAAGGTCTCCCTTCTGCTCATCATCAGCCATTGACAATGGAAGCTAGACCGTCATTGAACATGGGTTCAGTTTATCCCTTGTACTACGGTTATGATGCCAGAGAACCTCAGCCAAGGACCACCCCTCGAGATACAACGTGTTCCGACACAATCTTTGTTGGAAGACCAATCGTTCAAGTACCGGAGCCTTCTGGAATTGGTATATGGCAAAGCTATTCCGATGGTAAGTTCCGTCACTCTGCAAGCAGAGTGGCAGAAGAAAATGCTTTAGTCATTCGGGGGGAGGCACCAGGCAGGGAATGTGATTTATCGTTGAGATTGGGTCAATGCCTGCATCCATGTTCAGGCAGCAAGAGTAGTTCAGCATATGAAATAGATGATGTTGGTTTAGGAGCCTCACCCGAGGGCAGCAAGTTTAGCCATCTATCTTTGCAGAGAAATAAAGAATTCTGTTTTTATCCTAGAGAAACGGGTTATGGCACCATTGAATCTAGTTCTCAATGTTATGTAGACAGCGAAGATCGGAGCTTAGAGGCAACTCTTCGGAAGCGCAAAGCACCTTTAGGTAACAACATGGAGGATGGGCAATTTTGTCGGCATCTAGGGGTCCCATCCCATCGGTTTACTGGTAGGCCAGCAACAGGGAGGGAAAGTGAACACAAAGGAAAGACGAGAAATCGATGCTTACTATAA 1260 0.4992 MPRPGPRPYECVRRAWHSERHQPVRGSIIQQIFRVVVDAHSPATMKNKECQEKLPVVVLRAEEIMYSKANSEAEYLNPDTLWDRLNDAINTIIRRDETSETGDLLPPCVEAALNLGCKPVRTSRSDRHNNPRTYLSPKYQPPPSVPLKPVVGNPLNYGKVPASAVSPIPVPDSTHRSSKLMGSPSYHFSEGLPSAHHQPLTMEARPSLNMGSVYPLYYGYDAREPQPRTTPRDTTCSDTIFVGRPIVQVPEPSGIGIWQSYSDGKFRHSASRVAEENALVIRGEAPGRECDLSLRLGQCLHPCSGSKSSSAYEIDDVGLGASPEGSKFSHLSLQRNKEFCFYPRETGYGTIESSSQCYVDSEDRSLEATLRKRKAPLGNNMEDGQFCRHLGVPSHRFTGRPATGRESEHKGKTRNRCLL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1728 419 MobiDBLite consensus disorder prediction 401 419 - -
Pvu3g1728 419 Gene3D Coactivator CBP, KIX domain 13 80 IPR036529 GO:0003712|GO:0006355
Pvu3g1728 419 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 401 - -
Pvu3g1728 419 MobiDBLite consensus disorder prediction 120 145 - -
Pvu3g1728 419 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 401 - -
Pvu3g1728 419 MobiDBLite consensus disorder prediction 392 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1728 Pvu-Chr3 37599618 37603457 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1728 - - gmx:100806760 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1728 3 37599618 37603457 Pvu9g2197 9 31532532 31536414 PCT