Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1727 ATGGCAAGAAGCTTCTTCCTTGTGCTATTTGCAGTAGCCACCCTGCTTCATGGCTCCGCTGCACAGACCAGACACATGGTGGGTGATTCCACTGGCTGGACCATCCCTTCCGACGGTGCTGCAACCTACACCACCTGGGCTTCCGACAAAACCTTCACATTGGGTGACACTCTTGTGTTTAACTTTACCAACGGCCGACACGATGTGGCTAAGGTGACGAAATCAGCATATGACGCATGCAACGGTGCCACCACCCTTTTCACCCTTACCTCCGGTCCAGCGAGCGTGGTGTTGAACCAATCAGGGGAACAATATTATATTTGCTCCTTTGGAACACACTGTTCTCTCGGTCAGAAATTGACAATTAACGTTGTTAACGGAACCTCTGCCACTTCTTCCCCTGCCCCTCAACCCAGTAGGAGTGGTTCTCCACCAACGGCTAGCCCTGTCCCCACACCAACACAAGCACCTGCTCCAGGCCCATCCGCTGAACCAGTTACTTTCACTGTTGGAGACACCTTAGGCTGGACCGTTCCTGCTAATGGTGCTACAGCTTACGCATCCTGGGCCTCTGGCAAAACCTTCAAGGTTGGAGACATACTAGTGTTCAACTACCAATCTAACACACACAACGTTGAGGAAGTGACAAAGGAGAATTTCGATTCTTGCAACTCAACCTCTCCTCTTGCCACTTACACCACTCCACCTGCCAGAGTGACTCTCACCAAATCCGGTGCTCACTATTTCATCTGTGGCTTTCAAGGCCACTGTCCAGCAGGTCAAAAGCTTGTCATCAATGTCACCGGCAGCAACGCCACCTCGCCTTCCCCCGTCGCCACCCCACCTTCCGCCACCACCTCTCCGACCACCAACCCTTCTATGCCTTCTCCTGCAGGCTCTCTCGCCCCTCCCCCACTGAACTCCGGAGCTGCATCTCTCGGACTTGTTGGAGTTTCTGCCACCCTTCTTTCACTGGCCGCGGCTTTCTTCAATTAG 996 0.5331 MARSFFLVLFAVATLLHGSAAQTRHMVGDSTGWTIPSDGAATYTTWASDKTFTLGDTLVFNFTNGRHDVAKVTKSAYDACNGATTLFTLTSGPASVVLNQSGEQYYICSFGTHCSLGQKLTINVVNGTSATSSPAPQPSRSGSPPTASPVPTPTQAPAPGPSAEPVTFTVGDTLGWTVPANGATAYASWASGKTFKVGDILVFNYQSNTHNVEEVTKENFDSCNSTSPLATYTTPPARVTLTKSGAHYFICGFQGHCPAGQKLVINVTGSNATSPSPVATPPSATTSPTTNPSMPSPAGSLAPPPLNSGAASLGLVGVSATLLSLAAAFFN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1727 331 MobiDBLite consensus disorder prediction 128 166 - -
Pvu3g1727 331 MobiDBLite consensus disorder prediction 271 303 - -
Pvu3g1727 331 MobiDBLite consensus disorder prediction 138 160 - -
Pvu3g1727 331 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Pvu3g1727 331 Pfam Plastocyanin-like domain 176 261 IPR003245 GO:0009055
Pvu3g1727 331 SUPERFAMILY Cupredoxins 166 267 IPR008972 -
Pvu3g1727 331 CDD Phytocyanin 166 267 - -
Pvu3g1727 331 PANTHER PEELING CUPREDOXIN, PUTATIVE-RELATED 5 139 - -
Pvu3g1727 331 PANTHER PEELING CUPREDOXIN, PUTATIVE-RELATED 167 281 - -
Pvu3g1727 331 ProSiteProfiles Phytocyanin domain profile. 23 126 IPR003245 GO:0009055
Pvu3g1727 331 ProSiteProfiles Phytocyanin domain profile. 166 269 IPR003245 GO:0009055
Pvu3g1727 331 ProSitePatterns Type-1 copper (blue) proteins signature. 102 118 IPR028871 -
Pvu3g1727 331 Gene3D - 166 279 IPR008972 -
Pvu3g1727 331 Gene3D - 23 136 IPR008972 -
Pvu3g1727 331 PANTHER BLUE COPPER PROTEIN 167 281 IPR039391 GO:0009055
Pvu3g1727 331 PANTHER BLUE COPPER PROTEIN 5 139 IPR039391 GO:0009055
Pvu3g1727 331 MobiDBLite consensus disorder prediction 271 296 - -
Pvu3g1727 331 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1727 Pvu-Chr3 37584915 37586227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1727 169 329 Phytocyanin Superfamily AT2G25060 38.272 1.68e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1727 - - gmx:100805802 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1727 3 37584915 37586227 Pvu3g1727 3 37584915 37586227 ECH