Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1726 ATGGCAAGAAGCTTGTTCCTTGTGCTATTTGCAGTAGCCACCCTTCTTCATGGCTCCGCTGCACAGACCAGACACGTGGTGGGTGATTCCACTGGCTGGACCATCCCTTCCGGCGGTGCTGCAACCTACACCACCTGGGCTTCCGACAAAACCTTCACAGTGGGTGACACTCTTGTGTTTAACTTTACCAACGGCCGACACGATGTGGCTAAGGTGACGAAATCAGCTTATGACGCATGCAACGCTGCCACCACCCTTTTCACCCTTACCTCCGGTCCAGCGAGCGTGGTGTTGAACCAGTCAGGGGAACAATATTACATTTGCTCCTTCGGAACACACTGTTCCCTCGGTCAGAAATTGACAATTAACGTTGTTAACAGAAACTCTGCTACTCCTTCCCCTGCCCCTCAACCCAGTAGGAGTGGTTCTCCACCAACGGCTAGCCCTGTCCCCACACCAACACAAGCACCTACACCAGCACCAAGCACTGTGCCAGCACCTGCTCCAGGCCCATCCTCTGGACCAGTTACTTTCACTGTTGGAGACACCTCAGGCTGGATCGTTCCTTCTAATGGTGCTGCAGCTTACACATCCTGGGCTTCTGGCAAAACCTTCAAGGTTGGAGACATACTAGTGTTCAACTACCAATCTAACACACACAACGTTGAGGAAGTGACAAAGGAGAATTTCGATTCTTGCAACTCAACCTCTCCTCTTAAAACTTACACCACTCCACCTGCCAGAGTGACTCTCACCAAATCCGGTGCTCACTATTTCATCTGTGGCTTTCAAGGGCACTGTCCTGCAGGTCAAAAGCTTGCCATCAATGTCACCGGCAACAGCGCCACCTCGCCTTCCCCCATCGCCACCCCTCCTTCCGCCACCACCACCCCTCCTTCCCCCACCACCAACCCTTCTACGCCTTCTCCTACAGGCTCTCTCGCCCCTCCCCCATTGAACTCCGGAGCTGCATCTCTCGGACTTGTTGGAGTTTCTGCCACCCTTCTTTCACTTGCCGCGGCTTTCTTTTATTAG 1035 0.5333 MARSLFLVLFAVATLLHGSAAQTRHVVGDSTGWTIPSGGAATYTTWASDKTFTVGDTLVFNFTNGRHDVAKVTKSAYDACNAATTLFTLTSGPASVVLNQSGEQYYICSFGTHCSLGQKLTINVVNRNSATPSPAPQPSRSGSPPTASPVPTPTQAPTPAPSTVPAPAPGPSSGPVTFTVGDTSGWIVPSNGAAAYTSWASGKTFKVGDILVFNYQSNTHNVEEVTKENFDSCNSTSPLKTYTTPPARVTLTKSGAHYFICGFQGHCPAGQKLAINVTGNSATSPSPIATPPSATTTPPSPTTNPSTPSPTGSLAPPPLNSGAASLGLVGVSATLLSLAAAFFY* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1726 344 CDD Stellacyanin 23 124 - -
Pvu3g1726 344 MobiDBLite consensus disorder prediction 127 177 - -
Pvu3g1726 344 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Pvu3g1726 344 ProSiteProfiles Phytocyanin domain profile. 176 279 IPR003245 GO:0009055
Pvu3g1726 344 PANTHER BLUE COPPER PROTEIN 5 141 IPR039391 GO:0009055
Pvu3g1726 344 PANTHER BLUE COPPER PROTEIN 177 294 IPR039391 GO:0009055
Pvu3g1726 344 MobiDBLite consensus disorder prediction 291 315 - -
Pvu3g1726 344 MobiDBLite consensus disorder prediction 137 172 - -
Pvu3g1726 344 Gene3D - 176 288 IPR008972 -
Pvu3g1726 344 Gene3D - 23 135 IPR008972 -
Pvu3g1726 344 ProSiteProfiles Phytocyanin domain profile. 23 126 IPR003245 GO:0009055
Pvu3g1726 344 MobiDBLite consensus disorder prediction 278 318 - -
Pvu3g1726 344 CDD Phytocyanin 176 277 - -
Pvu3g1726 344 ProSitePatterns Type-1 copper (blue) proteins signature. 102 118 IPR028871 -
Pvu3g1726 344 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Pvu3g1726 344 Pfam Plastocyanin-like domain 186 271 IPR003245 GO:0009055
Pvu3g1726 344 SUPERFAMILY Cupredoxins 176 277 IPR008972 -
Pvu3g1726 344 PANTHER PEELING CUPREDOXIN, PUTATIVE-RELATED 5 141 - -
Pvu3g1726 344 PANTHER PEELING CUPREDOXIN, PUTATIVE-RELATED 177 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1726 Pvu-Chr3 37573110 37574598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1726 179 342 Phytocyanin Superfamily AT2G25060 39.157 7.63e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1726 - - gmx:100805802 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1726 3 37573110 37574598 Pvu3g1726 3 37573110 37574598 ECH