Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1716 ATGAATGAACGTCGAAAAACCATGAAGGTGAGGAGAAAGATCGGGAAGTATGAGGTGGGGCGAACTATTGGCGAAGGCACGTTCGCCAAGGTCAAGTTCGCGATAAATTCCGAAACAGGGGAGAGCGTGGCCATTAAAGTTATGGCTAAGACCACCATTCTCCAGCACAGAATGGTTGATCAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGGCATCCTAATATAGTTAGATTGCACGAGGTTTTGGCTAGCCAGACCAAGATCTACATAATCCTTGAATTTGTGATGGGAGGGGAACTATATGACAAAATTGTTCAGCTGGGAAGGCTTTCTGAAAATGAATCTAGGCGCTATTTTCAACAACTTATAGACGCTGTTGATCATTGTCATAAAAAGGGTGTGTACCATAGAGACCTGAAGCCTGAAAACCTTCTTCTTGATGCTTATGGAAATTTGAAAGTTTCCGACTTTGGATTGAGTGCATTGACTAAAAAGGGTGTTGGCCTTCTTCACACCACTTGTGGGACCCCAAATTATGTTGCCCCTGAGGTGCTCGGCAATCGAGGATATAATGGTGCAGCAGCTGATGTTTGGTCAAGTGGGGTCATCCTATATGTTCTAATGGCCGGACATCTTCCTTTTGAGGAGCCAGACCTTCCAACACTATACAGAAGGATCAATGCTGCAGAGTATGTTTGCCCATTCTGGTTTTCTGCTGAGACAAAGTCATTCATACATAAAATTCTAGATCCTAATCCAGAAACAAGGTTGAAAATTGAAGAAATAAGGAAAGATCCATGGTTCCAGAAAAACTATATTCCTGTCAAACTCGGGGAATATGAGCAAGTGAATTTGGATGATGTTCGGGCTGTTTTTGATGATATTGAGGACCAATATGTTGCTGAACAGTCAGAAATTACCGAGGGGGGTCCTTTGATAATGAATGCATTTGAGATGATTGCCTTATCACAGGGGTTGAATCTTTCACCATTGTTTGATAGGCATCAGGATTATGTAAAGCGGCAAACTCGATTTGTCTCTCGTAAACCAGCAAAAGTTATAATTTCTTCTATTGAAGCTGTTGCAGAGTCAATGGGTCTTAAGGTCCATTCTCGCAATTACAAGGTGAGGCTCGAAGGTTTTTCTGCAAACAAGGTTGGGCAATTTGCAGTGGTCTTAGAGGTGTTTGAAGTCGCACCATCCCTTTTCATGGTTGATATTCGGAAGGCAGCTGGGGATACTTTTGACTACCACAAGTTTTACAAGAATTTTTGTACCAAACTCGGAAGCATTATTTGGAGACCGGCAGGGACCATGCCAAATTCTAACACGCTTAAGCAAATGACTATATAA 1359 0.4194 MNERRKTMKVRRKIGKYEVGRTIGEGTFAKVKFAINSETGESVAIKVMAKTTILQHRMVDQIKREISIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQLGRLSENESRRYFQQLIDAVDHCHKKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKKGVGLLHTTCGTPNYVAPEVLGNRGYNGAAADVWSSGVILYVLMAGHLPFEEPDLPTLYRRINAAEYVCPFWFSAETKSFIHKILDPNPETRLKIEEIRKDPWFQKNYIPVKLGEYEQVNLDDVRAVFDDIEDQYVAEQSEITEGGPLIMNAFEMIALSQGLNLSPLFDRHQDYVKRQTRFVSRKPAKVIISSIEAVAESMGLKVHSRNYKVRLEGFSANKVGQFAVVLEVFEVAPSLFMVDIRKAAGDTFDYHKFYKNFCTKLGSIIWRPAGTMPNSNTLKQMTI* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1716 452 Gene3D Kinase associated domain 1, KA1 315 436 - -
Pvu3g1716 452 ProSiteProfiles Protein kinase domain profile. 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1716 452 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 448 - -
Pvu3g1716 452 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Pvu3g1716 452 Pfam Protein kinase domain 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1716 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pvu3g1716 452 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Pvu3g1716 452 Pfam NAF domain 313 372 IPR004041 GO:0007165
Pvu3g1716 452 SUPERFAMILY Protein kinase-like (PK-like) 14 316 IPR011009 -
Pvu3g1716 452 Gene3D Transferase(Phosphotransferase) domain 1 7 314 - -
Pvu3g1716 452 PANTHER - 10 448 - -
Pvu3g1716 452 CDD CIPK_C 317 430 - -
Pvu3g1716 452 SMART serkin_6 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1716 Pvu-Chr3 37426189 37439449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1716 9 378 CBL-interacting serine-threonine protein kinases AT5G35410 73.243 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu3g1716 Pkinase 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1716 - - gmx:100811380 830.091