Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1707 ATGGACATCATTGCTGTGATTATTATTACCTGCCTGTTTCTCATGTCTTTGGCCACAAGAGTTGAAACGCAGCAGATAGCACTCGGTGCCACACTTGAACCAAAGAGTACTACTACTAATGCTTTCTGGCTTTCTCCTTCTGCTCAATTTGCATTTGGTTTTTATCCACAAGAACAAGGTGGTGGTTTTGTCGTTGCAATTTGGCTGGTTAGCGGGGAGAACAAGACAGTGGTATGGACTGCGCAACGGAACGATCCTCCAGTAACCTCAGGTGCGAAGCTACAACTAAATATGGATGGTAAACTCGTACTGACAGACGAGCAAGGAGAAGAGAAGGTTATTGCGGATAATTCCAGTGCAAAAGCTCTCTCTGCCTCCGTGCTTGATTCTGGAAACTTTGTGCTCTACAGCAATAATAACAACATCATATGGCAGAGTTTCGATTACCCAACAGATACTTTGTTAGGTGGTCAATCTCTTCCAAATGGGCATCAACTGGTGTGCAGTTCATCAGAGAACAACCACTCAAGTGGACGGTTTCGTATAAAGGTGCAGGATGACGGAAATCTTGTTCTGTATCCAGTGGACACAACAGACACAGTAACGAATGCTTACTGGATCAGTAATTATAATTATTTTGATCGTAATACTTTTGCTCGTAATCCTTTTAAGGATACTCAGCGGTATATCGACCAAAATGGTACACGGCGGATTGTGAATGAAAGCAGTGATGGGAGAACTATGAATGTTCTAAGTGTAGTCAGTGATGATGGGAACCAGATCATCTATCGTGCAACCCTGAATTATGATGGGTTATTTCATCTGTATGCTCATTTTAAGAATGGTAGTATCAAAAATTTGGCACATTGGCCGCAGGATAGAGACATGTGTTTAGTAAAAGGTTTTTGTGGCTTCAACAGCTATTGCACATACGTTGATGATCAACCAGTATGCTCTTGTCTTTCGGGTTTTATCTCCATACATCCAAACGACTCCACTCTGGGCTGCAAAAGGAGCTTTCCGAAGGAAGATTGTAGGGGGAAGAAAGACAGCACAACCTCTTATGAGATGAAGTCGAAGGAGAATATTGCATTGGTGGATGGTCCTTATTTAAAGAATGAAATGTCACAACAAGAGTGCTCCGCTACTTGCTTGGCTGATTGCAATTGTGAGGCTGCATCTTACGACGGTACAAACTGCATGAAACAGAGGCTGCCTTTGAGATATCTCAGATGGACAATAGAAAATGATGGTAGCAGATTGCAATCGTGGAAAGTGGGAATGCTATTGTGGAAAGTGGGAGACAGCCTCAGCAATCGGACAGGGAGCGATAATCCTGTGCCTGAACAACCACCAATCAAAGTAACAAGTAATAAAGCAACGGTGCATATTATTGTCATTACATCCATTTTTTCTCTGCTTTTATGTTCAACCATTGTCATCTCCAGCCACTACATGTACAAGATTCGGCTTTTGAAATATAAAAGATTGAAGGAAACTGGGAACTTGGGCCTGAATGAAGAGGTGACTTTGAGAAGGTTTTCATACAGCGAACTCAAAAGAGCCACAAACAATTTCAAGATAGAACTGGGAAAAGGGTCTTTCGGAGCAGTTTACAAGGGGGCGTTGGAGAAAGGTAAGAGGTTGATTGCTGTGAAGAGACTGGAGAAGTTAGTGGAAGAAGGAGAAAGCGAGTTCCAAGCAGAAATGAGAGCCATTGGGAAAACCCGTCACAGGAATCTAGTTCGTTTGTTGGGTTTCTGTGCGGAGGGTTCTAAAAGGCTTCTGGTGTATGAGTACATGTCCAATGGTTCCCTTGGAAACCTTATCTTCGTGGGTAAAAGTCAGAGACGTCCAGAGTGGGATGAGAGAGTAAGAATAGCGGTGGAGATTGCGAGAGGGATAATGTATCTCCATGAAGAGTGTGAGGCACCAATCATTCATTGTGACATAAAGCCTGAGAACATCTTGGTGGATGAGTTCTGGACTGCCAAAATATCCGATTTTGGGCTGGCCAAACTTCTCATGCCCGATCAAACCAGAACCATGACAAGGGCTAGAGGGACAAGAGGGTACGTGGCCCCTGAATGGAACAAGAATGTCCCCATATCTGTCAAGACTGATGTTTATAGCTACGGAATAATGCTGTTGGAAATTCTATGTTGCAGAAGAAACTTCGAAGTTCATGTCTCTGAACCTGAGGCGGTTATGCTCTCCACCTGGGCTTATAACTGTTTTGTTGCAGGAAAACTCAATAAGCTTTTTCCTTGGGAAGTCGTGGATGACAAAACTGCTGTGGAAAATATGCTTAAAGTGGCACTTTGGTGTATCCAAGATGAACCTTTTCTTCGCCCAACAATGAAGAGTGTCGTATTGATGTTAGAAGGGGTCACGGACATAGCAATTCCTCCTTGTCCCACTTCCAATTCTGCTTGA 2436 0.4331 MDIIAVIIITCLFLMSLATRVETQQIALGATLEPKSTTTNAFWLSPSAQFAFGFYPQEQGGGFVVAIWLVSGENKTVVWTAQRNDPPVTSGAKLQLNMDGKLVLTDEQGEEKVIADNSSAKALSASVLDSGNFVLYSNNNNIIWQSFDYPTDTLLGGQSLPNGHQLVCSSSENNHSSGRFRIKVQDDGNLVLYPVDTTDTVTNAYWISNYNYFDRNTFARNPFKDTQRYIDQNGTRRIVNESSDGRTMNVLSVVSDDGNQIIYRATLNYDGLFHLYAHFKNGSIKNLAHWPQDRDMCLVKGFCGFNSYCTYVDDQPVCSCLSGFISIHPNDSTLGCKRSFPKEDCRGKKDSTTSYEMKSKENIALVDGPYLKNEMSQQECSATCLADCNCEAASYDGTNCMKQRLPLRYLRWTIENDGSRLQSWKVGMLLWKVGDSLSNRTGSDNPVPEQPPIKVTSNKATVHIIVITSIFSLLLCSTIVISSHYMYKIRLLKYKRLKETGNLGLNEEVTLRRFSYSELKRATNNFKIELGKGSFGAVYKGALEKGKRLIAVKRLEKLVEEGESEFQAEMRAIGKTRHRNLVRLLGFCAEGSKRLLVYEYMSNGSLGNLIFVGKSQRRPEWDERVRIAVEIARGIMYLHEECEAPIIHCDIKPENILVDEFWTAKISDFGLAKLLMPDQTRTMTRARGTRGYVAPEWNKNVPISVKTDVYSYGIMLLEILCCRRNFEVHVSEPEAVMLSTWAYNCFVAGKLNKLFPWEVVDDKTAVENMLKVALWCIQDEPFLRPTMKSVVLMLEGVTDIAIPPCPTSNSA* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1707 811 Gene3D - 24 147 IPR036426 -
Pvu3g1707 811 SUPERFAMILY Protein kinase-like (PK-like) 508 795 IPR011009 -
Pvu3g1707 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 209 IPR036426 -
Pvu3g1707 811 Gene3D Transferase(Phosphotransferase) domain 1 601 802 - -
Pvu3g1707 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Pvu3g1707 811 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 809 IPR045874 GO:0004672
Pvu3g1707 811 ProSitePatterns Protein kinases ATP-binding region signature. 530 553 IPR017441 GO:0005524
Pvu3g1707 811 ProSiteProfiles Protein kinase domain profile. 524 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1707 811 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Pvu3g1707 811 Pfam D-mannose binding lectin 76 160 IPR001480 -
Pvu3g1707 811 CDD STKc_IRAK 530 796 - -
Pvu3g1707 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 19 809 - -
Pvu3g1707 811 Pfam Protein kinase domain 529 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1707 811 Pfam S-locus glycoprotein domain 253 325 IPR000858 GO:0048544
Pvu3g1707 811 CDD B_lectin 38 150 IPR001480 -
Pvu3g1707 811 Gene3D Phosphorylase Kinase; domain 1 490 600 - -
Pvu3g1707 811 SMART serkin_6 524 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1707 811 Coils Coil 552 572 - -
Pvu3g1707 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Pvu3g1707 811 SMART blect_4 34 150 IPR001480 -
Pvu3g1707 811 Gene3D - 148 252 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1707 Pvu-Chr3 37315032 37317781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1707 447 803 Receptor kinase-like Gene Family AT4G04510 38.147 5.83e-66 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu3g1707 Pkinase 7.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1707 - - gmx:100815958 1119.38