Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1706 ATGGCCTTCCTAGCCCTTCTGTTGTCGCTGTTATGCATGCTATTTGCAAAACAAGGTGAGAGCATCATAGAGGCAGGGTCTTGGCTCTCTGCTGAACTTGGGAATCATAGTTCATGGGTATCACCTTCTGGCCATTTTGCTTTTGGCTTTTACCCACAAGGCACTGGCTTTGCAGTGGGTATATGGCTGATTAGTGCTGCTAGTCCACCTCAAAATACTATTGTCTGGACAGCTAACCGTGATAGCTTCCCACTCCCCGCAAATTCAACGTTGAATATCACCACCACTGGTCTGCGGCTTTTCCCGAGTGGGAGAGAAGGCTATGCTCTCATTTCACCTACTAATGTAACTTCGGCATCTATGCTTGATTCTGGCAACTTTGTGCTCTATACCGACAATGGCAGTACTGTTGTTTGGCAAAGCTTTGATCATCCAACTGACACTTTACTAGGAGGTCAGAGTTTAGTTACCGACGTCAAACTGGTTTCCAGTCTGTCCCAAACAGACCATTCCAGTGGAGCTTTCTTTATCGTCTTGCAAGGAGATGCAAACCTCGTTGCCTATCCCGTCAACAGCGCAGCATCTGCGGATGATGCTTACTGGGCTTCAAACACTTGGTCTAAACCTTTCACACAGCTCAGGCTGAATGTCACGGGCTATCTTTGCTTTAATGATGAGATTGCGTGTTTGTATAATAACAGTAGCCCTGGAAACAAATCAGACAACACAAATTCAATCTACCGTGCAACACTTGCTGCAGACGGGAACTTTATACTGTATGAGCACCAATTTGAGGACAGTAGTGGTTCTACACATGTCCGAGTACTGTGGAGAACCTCGATTGAGGCATGTCAAATCAAGGGGTTTTGTGGGTTTAATAGTTATTGCTCAAACGTAACAGGCGATGAGGTGTGTCAGTGTTTTCCTGGTTTCGTCCCCTCCAACAGCAGTCGTAACGTGTCTCGGGACTGCGTACTGGCCTATGCAGAAGATGGTTGCCAAAGCAATATTATGTATAATATTACTCAGTTGGAGGGTGTGTATTGGGCTGATAGTCCATATTCTGTCATACCGATGAGGAAGAAAGAGTGCGAGAAGTCTTTATTGGATGATTGTGATTGCACGGCGGTATTATATTCAAATGGAACCTGCCAAAAATACGCACTCCCGCTAACATATGGCAGACGGCTTCAAAACTCATCCATCGTGGCACTCTTCAAGAATTCTTTCGGAATCCTCCAAAATCCAATTTCAACCAACTCCTCTCAGAAGCCTAAATTCAAGGTGGTTACGGATAACAAGAAAAGTCTGATAATGATTCTAGCCTTTACTTTGGGTTCCATTTCATTCTTATCTTTGATATTTGCAGTCTCCGTTTTCATCACTTACAAGCGGAATCTGCATAAGTATAGAACGTTGGCTGCAAGTGAGAACCTGGGATTTACTGGAGAATGTTCTCTGCGTTCATTTTCTTTCGATGAACTTGTCAAATACACTGGAGGGTTCACGGAAGAGATAGGGAGAGGATCATTTGGAGCGGTTTACAGAGGCGAAACAGGTGACGACACAAGTATCGCTGTAAAGAGATTGGAGAGAGTTGCTGAGGATGATGGGGAGAGGGAATTTCGAAATGAGATTACTTCCATTGCTCGAACACATCATAGGAATTTGGTTAAGCTCATTGGTTTTTGCATAGATGGAGCTAGGAGTCTTCTTGTTTACGAATACGTAAGAAACGGGTCTCTTGGAAGTCTTCTCTTCGATGATGAGAAACAAATATCCTGGAGAGACAGACTAAAAATTGCATTGGATGTTGCTAGAGGAGTCCTTTATCTACACGATGAGTGCGAGGTCCGCATTATCCATTGCAATATAAATCCTGGAAATATACTACTTGATGAAACGTGGACTGCAAAGATCTCTGATTTTGGATTTGCAAAACTAATCAAGAAGTCTGACCATTCAAGAATGAGAAAAGAGGATGATGGGACAAGAAAGTACTTGGCACCTGAATGGCAGAAGGATGCACCAGTGTCTGTAAAATTTGACATTTACAGTTTTGGAATGGTGGTGCTGGAGATTGTGTGCCGCAGACGCAGCATAGAAATGAATGTTTCCTCAGAAGAGGAGATACTTCTTTCCAGCTGGGTATATAAATGTTTTGTTGAAGGGCAATTAAATAGGGTTGTGAAGGAGGATGAAGTTGTAGAGTGGAAGATAATGGAAAGAATGGTGAAAGTGGGGTTGTGGTGTGTGCAAGACACTCCTTCTCTTCGACCTTTGATAAAGAATATCATCTTGATGTTGGAGGGATTGAAAGATATTCCAATTCCTCCCTCTCCAACCCACCCCCATTATTAA 2361 0.4346 MAFLALLLSLLCMLFAKQGESIIEAGSWLSAELGNHSSWVSPSGHFAFGFYPQGTGFAVGIWLISAASPPQNTIVWTANRDSFPLPANSTLNITTTGLRLFPSGREGYALISPTNVTSASMLDSGNFVLYTDNGSTVVWQSFDHPTDTLLGGQSLVTDVKLVSSLSQTDHSSGAFFIVLQGDANLVAYPVNSAASADDAYWASNTWSKPFTQLRLNVTGYLCFNDEIACLYNNSSPGNKSDNTNSIYRATLAADGNFILYEHQFEDSSGSTHVRVLWRTSIEACQIKGFCGFNSYCSNVTGDEVCQCFPGFVPSNSSRNVSRDCVLAYAEDGCQSNIMYNITQLEGVYWADSPYSVIPMRKKECEKSLLDDCDCTAVLYSNGTCQKYALPLTYGRRLQNSSIVALFKNSFGILQNPISTNSSQKPKFKVVTDNKKSLIMILAFTLGSISFLSLIFAVSVFITYKRNLHKYRTLAASENLGFTGECSLRSFSFDELVKYTGGFTEEIGRGSFGAVYRGETGDDTSIAVKRLERVAEDDGEREFRNEITSIARTHHRNLVKLIGFCIDGARSLLVYEYVRNGSLGSLLFDDEKQISWRDRLKIALDVARGVLYLHDECEVRIIHCNINPGNILLDETWTAKISDFGFAKLIKKSDHSRMRKEDDGTRKYLAPEWQKDAPVSVKFDIYSFGMVVLEIVCRRRSIEMNVSSEEEILLSSWVYKCFVEGQLNRVVKEDEVVEWKIMERMVKVGLWCVQDTPSLRPLIKNIILMLEGLKDIPIPPSPTHPHY* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1706 786 ProSiteProfiles Bulb-type lectin domain profile. 146 272 IPR001480 -
Pvu3g1706 786 Pfam D-mannose binding lectin 73 160 IPR001480 -
Pvu3g1706 786 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Pvu3g1706 786 PIRSF SRK 1 785 IPR024171 GO:0004674
Pvu3g1706 786 SUPERFAMILY Protein kinase-like (PK-like) 484 770 IPR011009 -
Pvu3g1706 786 ProSiteProfiles Protein kinase domain profile. 500 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1706 786 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 784 - -
Pvu3g1706 786 ProSiteProfiles Bulb-type lectin domain profile. 24 151 IPR001480 -
Pvu3g1706 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 171 262 IPR036426 -
Pvu3g1706 786 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 5 784 - -
Pvu3g1706 786 Gene3D Phosphorylase Kinase; domain 1 476 576 - -
Pvu3g1706 786 Gene3D - 23 146 - -
Pvu3g1706 786 Gene3D - 147 269 IPR036426 -
Pvu3g1706 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 207 IPR036426 -
Pvu3g1706 786 SMART blect_4 146 273 IPR001480 -
Pvu3g1706 786 SMART blect_4 30 145 IPR001480 -
Pvu3g1706 786 Pfam Protein tyrosine and serine/threonine kinase 502 766 IPR001245 GO:0004672|GO:0006468
Pvu3g1706 786 Gene3D Transferase(Phosphotransferase) domain 1 577 776 - -
Pvu3g1706 786 Pfam S-locus glycoprotein domain 241 314 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1706 Pvu-Chr3 37311935 37314295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1706 361 781 Receptor kinase-like Gene Family AT4G18250 33.556 3.14e-64 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu3g1706 PK_Tyr_Ser-Thr 9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1706 - - cam:101496142 874.389