Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1696 ATGCCATGGTCTTTTGCTTCCCCTTATGTACCTCCGCATCGCCACTCTAACTACATTCCACCTTCCTCCGACGATCCCGCTCACCACGGATTTCCCCGTGCTGGAGCTTGGCCGCGCGGCGGTGCCCGTGGTGCCTCCGGTGGTCGAGGATTCTCTCGCCCCCGGGAGCCTTATCAACCGAACTCCAGCTTCCCTACGGAAGAACCAGAAAACGGCGAGGCTATCAACTTCGACGCGTACGAGTCGGTTCCGGTCGAGGCGAGTGGGAATAACGTGCCTCCGCCGGTGAACGTCTTCGACGATACGGACTTGGACGAAGGGTTGAAGAAGAACATCAAGCGATGCAAGTACGTGAAACCCACGCCCGTTCAGCGTCACGCGATTCCCATAGCTACCGCTGGCCGTGACCTCATGGCGTGTGCACAGACAGGGTCGGGGAAAACGGCGGCGTTTTGCTTTCCCATCATATCTGGGATTTTGAAGGGTCGTTCCTCTCCTGGGTTTTCGCCTGTGTCTCGTGGTGCTGCTGTTGCATACCCCACTGCACTTATTTTGTCTCCTACGAGGGAGTTGTCTTGCCAGATACGCGACGAGGCGAACAAATTTGCATTTCAAACTGGAGTGAAGGTTGTTGTTGCCTATGGAGGGTCTCCTATCATTCAGCAGCTGCGCCTTTTGGAGAAGGGAGTTGACATATTGGTTGCCACTCCTGGGCGTTTGGTGGATATTATCGAGAGAGAAAGGGTTTCATTGGCGAGGATAAAGTATCTTGCTCTAGACGAAGCTGATCGTATGCTGGACATGGGTTTTGAGCGTCAAATACGCAAGATTGTGGAGGAAATGCACATGCCACCGCCAGGTATTAGGCAGACATTGTTGTTTAGTGCAACCTTCCCTAATGATATACAGAAGCTAGCATCGGACTTTTTGATGGACTACATATTCCTGTCTGTTGGGAGAGTTGGGTCTAGTACTGAATTGATTGTGCAGAAGATTGAGCTTGTACATGATACAGACAAAAGAGACAAACTTGTTGATCATCTTCGTCGCCAAAAGGTGCATGGGACCAATGGGAGGCATGCTTTAACTCTTGTATTTGTTGAAACAAAAAGAGGAGCAGATGCTTTGGAAAACTGGTTATTGAAAAGTGGCTTTCCCGCTATTGCTATACACGGAGACAAAGTTCAATTGGAAAGGGAACGGGCTTTAAGATCTTTTAAATCTGGAAATACTCCTATTTTGGTTGCAACTGACGTTGCTTCGAGGGGATTGGATATCCCGCATGTGGCTCATGTCATAAACTTTGACTTGCCTAGAGACATAGATGACTATGTACATAGAATTGGACGAACAGGCCGTGCAGGCAAATCTGGTTTAGCCACTGCTTTCTTCAGCGACAAGAACAGTCCAATGGCAAAGGCTCTTGTTGGAATCTTGCAGGAGGCAAACCAAGAAGTTCCTTCTTGGCTCATCCAGTTTGCAGAGGGTTCCTCTTCAGGTAGCCGTGGTTATGGATCACAGCGTTACAGCGGTGGTAGCTATGGCGGTGGATTACAGCGTTACGGCAGTTGTAGCTATGGAGGTCGTGACTTTCGAAATCCCACTGAACCTGAGGTGCAGAGGTACGACAGTGGTAGCTATGGCGGTCGTGATTTTCGAAATCCCACTGAACCTGAGGTCCAGAGCTACAACTGCTACGGTTCTCATGGCAATGCTGATCATGGTGTAGAGTCTGTAGTAATGATCAAACTGATGTCAAATCTGGTGAATTGTGTGGAGATGGGAAGGTTGGTGAAGATGGGCCTAGCGGTTATGAAGCTATTGTTCCCACTGGATGGGACTAGACTTGTATAG 1854 0.4957 MPWSFASPYVPPHRHSNYIPPSSDDPAHHGFPRAGAWPRGGARGASGGRGFSRPREPYQPNSSFPTEEPENGEAINFDAYESVPVEASGNNVPPPVNVFDDTDLDEGLKKNIKRCKYVKPTPVQRHAIPIATAGRDLMACAQTGSGKTAAFCFPIISGILKGRSSPGFSPVSRGAAVAYPTALILSPTRELSCQIRDEANKFAFQTGVKVVVAYGGSPIIQQLRLLEKGVDILVATPGRLVDIIERERVSLARIKYLALDEADRMLDMGFERQIRKIVEEMHMPPPGIRQTLLFSATFPNDIQKLASDFLMDYIFLSVGRVGSSTELIVQKIELVHDTDKRDKLVDHLRRQKVHGTNGRHALTLVFVETKRGADALENWLLKSGFPAIAIHGDKVQLERERALRSFKSGNTPILVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGKSGLATAFFSDKNSPMAKALVGILQEANQEVPSWLIQFAEGSSSGSRGYGSQRYSGGSYGGGLQRYGSCSYGGRDFRNPTEPEVQRYDSGSYGGRDFRNPTEPEVQSYNCYGSHGNADHGVESVVMIKLMSNLVNCVEMGRLVKMGLAVMKLLFPLDGTRLV* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1696 617 Gene3D - 57 318 IPR027417 -
Pvu3g1696 617 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 56 532 - -
Pvu3g1696 617 MobiDBLite consensus disorder prediction 532 554 - -
Pvu3g1696 617 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 340 494 IPR001650 -
Pvu3g1696 617 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 128 316 IPR014001 -
Pvu3g1696 617 CDD SF2_C_DEAD 328 464 - -
Pvu3g1696 617 Gene3D - 319 497 IPR027417 -
Pvu3g1696 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 473 IPR027417 -
Pvu3g1696 617 Pfam Helicase conserved C-terminal domain 358 455 IPR001650 -
Pvu3g1696 617 Pfam DEAD/DEAH box helicase 121 305 IPR011545 GO:0003676|GO:0005524
Pvu3g1696 617 SMART helicmild6 374 455 IPR001650 -
Pvu3g1696 617 CDD DEADc_DDX3_DDX4 99 322 IPR044763 GO:0003724|GO:0005524
Pvu3g1696 617 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 97 125 IPR014014 GO:0003724
Pvu3g1696 617 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 56 532 - -
Pvu3g1696 617 MobiDBLite consensus disorder prediction 1 71 - -
Pvu3g1696 617 SMART ultradead3 116 331 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1696 Pvu-Chr3 37163099 37166120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1696 99 471 Eukaryotic Initiation Factors Gene Family AT3G13920 34.225 2.01e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1696 K11594 - gmx:100791226 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1696 3 37163099 37166120 Pvu3g1696 3 37163099 37166120 ECH