Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1680 ATGAATGCTCCTACCACTGTAACCGCTATCACCACCACACCTCCGAGTAGGGATGAACCCGACTACGACAGCAGCTCCTCCTCCATCACGGTGCCGGAATCCAGCCGGAGCTGGATGACCAACCTCAGCTTCGGCAGTCGGCGCCGCCGGAGCTCGGTCTCTCTGTGCTCCTCCACCCTGGAGAGCCCGCACGCGAGGCCCCACAAGGCGAACCAGGCTGCATGGGAGGTCATGCGGCGGCTCCGGCGGGACAAGGGGCAGGTGGGTCTGGAGCACTTCCGCCTGCTGCGGCGGCTGGGAAGCGGCGACATCGGGAACGTGTACCTTTGCCAGATAAGGAACCCTGTGGTGGGGTTGCCGCAGTGCTTTTATGCGATGAAGGTGGTGGACCGAGAGGCACTTGCGATAAGGAAGAAGCTGCAGAGGGCGGAGATGGAGAAGGAGATTCTTGCCATGCTTGATCACCCCTTCTTGCCTACTTTGTACACTGAGTTTGACGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGCCCCGGAGGTGACTTGTACGCTGCACGCCAACGCCAGCCCGGGAAGCGCTTTTCCATTACTTCCACTAAGTTTTATGCGGCTGAGACTCTATTGGCATTAGAGTATCTTCACATGATGGGCATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTTGTGAGGGAGGATGGACACATTATGCTTTCAGATTTTGATCTTTCGCTCAAATGTGACGTTGTTCCCAAGCTGTTAAGGAGTAAGACGAGAGTGGAACGCAGTATCAAGAGTACAAAGAGATCTGTGCCAGCCTGCACTGCCCCCATGCAGCCTGTGCTGTCATGTTTCTTGGCATCAAGCAAGAAAAAGAAAGCGACTGTGACAACAGTTATAAGGGAAAATGTTGAGGTGGAAGAGCTTGATCCGGAGCTGGTGGCTGAGCCTATTGATGCCAAATCCAAGTCATTTGTGGGGACACATGAGTACTTGGCACCAGAAGTGATATTGGGGCAAGGACATGGGAGTGCAGTGGACTGGTGGACGTTTGGGGTGTTCTTGTATGAGATGTTATACGGGAGAACACCCTTCAAAGGTGAAAATAATGAGAAAACTCTCGTCAACATTTTGAAGCAACCATTGGCTTTCCCTAGAATTGCAGCTAGCAGCAGCAAGGATTATGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGCTGTTAGTGAAGAATCCAAATAAGAGAATTGGAAGCTGTATGGGTTCTGTTGAGATCAAAAGGCATGAGTTCTTCAAGGGTGTAAATTGGGCCTTAATTAGATCAGTTAGGCCACCTGAAGTCCCTAATGATATGAACAAAATTAGGAGTAGGGTTTTGGTACCAAAACTAAGCAAAACAGACAGGGATCAGCCATATCAGCTTAGAAATCATCATTTTGAATACTTCTAA 1455 0.5024 MNAPTTVTAITTTPPSRDEPDYDSSSSSITVPESSRSWMTNLSFGSRRRRSSVSLCSSTLESPHARPHKANQAAWEVMRRLRRDKGQVGLEHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSITSTKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRVERSIKSTKRSVPACTAPMQPVLSCFLASSKKKKATVTTVIRENVEVEELDPELVAEPIDAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLAFPRIAASSSKDYEEMVKVQDLISKLLVKNPNKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPNDMNKIRSRVLVPKLSKTDRDQPYQLRNHHFEYF* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1680 484 PANTHER FLIPPASE KINASE 1-RELATED 16 484 - -
Pvu3g1680 484 Pfam Protein kinase domain 322 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1680 484 Pfam Protein kinase domain 94 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1680 484 MobiDBLite consensus disorder prediction 1 32 - -
Pvu3g1680 484 Gene3D Phosphorylase Kinase; domain 1 91 177 - -
Pvu3g1680 484 Gene3D Transferase(Phosphotransferase) domain 1 320 451 - -
Pvu3g1680 484 CDD STKc_phototropin_like 92 450 - -
Pvu3g1680 484 Gene3D Transferase(Phosphotransferase) domain 1 178 247 - -
Pvu3g1680 484 ProSiteProfiles Protein kinase domain profile. 93 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1680 484 Coils Coil 126 146 - -
Pvu3g1680 484 SMART serkin_6 93 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1680 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Pvu3g1680 484 PANTHER PROTEIN KINASE PINOID 2 16 484 - -
Pvu3g1680 484 SUPERFAMILY Protein kinase-like (PK-like) 75 457 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1680 Pvu-Chr3 37023966 37026042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1680 18 484 AGC Kinase Gene Family AT2G26700 58.667 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu3g1680 Pkinase 1.3e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1680 3 37023966 37026042 Pvu3g1680 3 37023966 37026042 ECH
Pvu3g1680 3 37023966 37026042 Pvu9g2049 9 29363879 29365602 PCT