Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1667 ATGTTGGTCTGCGGCCAAGAAGAGATTGAACTGTCACGGGATGGCAGCCACTACAGTCTCTCCACCGGAATACTTCCGTCTCTCGGAGCCAAAAGCAACCGCAGAATCAAGCTCCGCCGCTTCATTCTATCGCCCTACGACCGCCGTTACAGGATATGGGAAACTTTCCTTGTTGTTCTGGTAGTTTATACTGCTTGGGTTTCTCCCTTCGAATTCGGATTCTTGAAGAAGCCACAAGCACCCCTTTCCATTTCTGATAATATTGTCAATGGATTTTTTTTCGTGGATATAGTTCTCACCTTCTTCGTGGCTTACATTGACAAAACCACCTATTTGTTCGTGGACGACCGGAAAGATATTGCTTGGAAATATGCAAGGACTTGGTTGGCGTTCGATGTTATCTCCATCATTCCTTCAGAGCTTGTACAAAAGATATCACCTTCTCCTCTTCAATCCTATGGTTTATTCAACATGCTTCGCCTTTGGCGTCTTCGAAGAGTCAGTGCTTTGTTTTCTCGGCTTGAGAAGGACAGAAACTATAACTATTTTTGGGTTCGGTGTGCTAAGCTTATTTCTGTTACCCTCTTCGCCGTTCATTGTGCTGCATGTTTCTATTATCTTATTGCTGCACGTTATCATGATCCAGCAAAGACATGGATTGGTGTAGCGATGGGTAATTTCCTTGAACACAGCTTGTGGTCAAGATATGTGACATCTATATACTGGTCTATTACTACCTTAACAACTGTTGGCTATGGAGATTTGCATCCAGTGAATTCAAGGGAGATGACCTTTGACATCTTTTATATGCTCTTTAATCTGGGGTTAACAGCATATTTGATTGGTAATATGACCAATTTGGTTGTCCATGGCACAAGTCGAACCAGAAAATTTAGAGATACCATCCAAGCTGCCTCAAATTTTGCCCATAGGAATCAATTGCCTCCTAGGTTGCAAGACCAAATGCTTGCCCACTTGTGTTTGAAGCATAGAACAGACTCAGAAGGGTTGCAGCAGCAAGAGACACTTGATTCTCTTCCCAAAGCCATCAGATCCAGCATTTCACATCATCTTTTCTATTCTCTTATTGATAAGGTCTACTTGTTTCACGGGGTTTCGGATGACTTGCTCTTTCAATTGGTGTCAGAGATGAAAGCTGAATATTTTCCACCCAAAGAAGATGTTATCTTGCAAAACGAAGCCCCCACTGACTTTTATATACTGGTCACTGGTGCCGTGGACCTGGTAATTTTTCAAAATGGGGTTGAACAGGTTGTTGGAGAGGCCAAAACTGGTGATCTTTTTGGTGAGATTGGTGTGCTCTGTTACAAGCCACAGCTTTTCACAGTTCGAACGAAGCGACTAAGCCAGTTGCTGAGGTTAAACCGTACTACTTTCTTGAATATTCTTCAGGCCAACGTGGGAGACGGAACCATAATCATGACTAATCTGCTTCAGCATTTAAAGGAGCTCAACGATCCAATCATGGAGGGAGTTTTGGCAGAGATTGAGACCATGTTAGCTCGTGGTAGAATGGACCTACCAGTTAGTGTGTGCTTTGCGGCAGCAAGAGGAGATGACTTCTTGTTACATCAGTTGCTGAAACGAGGCATGGATCCAAACGAATCCGACAACAATCGAAGGACAGCTTTGCATATAGCAGCATCTCACGGCAAAGAGAACTGTGTTCTGCTTCTGTTAGATTATGGGGCGGATCCCAACATTAAAGATTTGGATGGCAATGTAGCACTGTGGGAGGCTATAGTGGGAGGACATGAGTCAGTTAGCAAGGTGTTGGAAGAAAATGGAGCTAACTTGCAATGCGGGGATGTGGGCCAGTTTGCATGTACGGCTGTTGAGCAGAACAAATTGAAGTTGCTGAAGGAAATAAGGCGCTACGGAGGAGATATCACACTTCCAAGCATCAACGGTGGGACCACAGCGTTGCACGTTGCAGTCTCGGACGGCAACGTTGAAATTGTCAAATACCTTTTGGATCACGGGGCAAGCATTGACAAACCTGACAAGCATGGCTGGACCGCTACAGATCTGGCAGATCAGCAATCACATACAGAAATAAAAGCCATTTTTGACTCCACTGTGGAGCCTAAGGTTCAGTCTTCCGTTACCATTCCCGAGAAGCCGAGTAAGATCAGGTACCTTGGAAGGTTTACTAGTGAGCCAACCATGCCTTTACCCCTTGACGGCTCATTTCATGGAACGGATGCCTCTTGGAGCCAGAGCCAGAGACAGAGCCAGACCCAAACCCGTCCAAGGCGTAAGAGCAACAATTATCATAACTCACTCTTAGGGATAATGGTAGCAGCACACAATGGGGAAAAGGACCTGCTTTTGTCTCTTAACATGAATAACAAGGCAAGCAATGGCATGCAGAGTAGTAGTGCAGTTGGTTCAACTAGGGTAGTTATTAGTTGCCCTGAGAGGGGTGAGGTTGCGGGGAAGCTTGTTTTACTACCTGAAACCTTTCAAGAGCTACTTGAGATTGGAGCCAAAAAATTTGGTTTCTATCCTGCTAAGATTATATGCAAAGATGGAGGTCAAATCGAAGATTTAGAGGTTATTAGAGATGGTGACCATCTTGTCTTTCTAGGTGCTGATGGGCTATAG 2628 0.4463 MLVCGQEEIELSRDGSHYSLSTGILPSLGAKSNRRIKLRRFILSPYDRRYRIWETFLVVLVVYTAWVSPFEFGFLKKPQAPLSISDNIVNGFFFVDIVLTFFVAYIDKTTYLFVDDRKDIAWKYARTWLAFDVISIIPSELVQKISPSPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCAKLISVTLFAVHCAACFYYLIAARYHDPAKTWIGVAMGNFLEHSLWSRYVTSIYWSITTLTTVGYGDLHPVNSREMTFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAHRNQLPPRLQDQMLAHLCLKHRTDSEGLQQQETLDSLPKAIRSSISHHLFYSLIDKVYLFHGVSDDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVIFQNGVEQVVGEAKTGDLFGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNILQANVGDGTIIMTNLLQHLKELNDPIMEGVLAEIETMLARGRMDLPVSVCFAAARGDDFLLHQLLKRGMDPNESDNNRRTALHIAASHGKENCVLLLLDYGADPNIKDLDGNVALWEAIVGGHESVSKVLEENGANLQCGDVGQFACTAVEQNKLKLLKEIRRYGGDITLPSINGGTTALHVAVSDGNVEIVKYLLDHGASIDKPDKHGWTATDLADQQSHTEIKAIFDSTVEPKVQSSVTIPEKPSKIRYLGRFTSEPTMPLPLDGSFHGTDASWSQSQRQSQTQTRPRRKSNNYHNSLLGIMVAAHNGEKDLLLSLNMNNKASNGMQSSSAVGSTRVVISCPERGEVAGKLVLLPETFQELLEIGAKKFGFYPAKIICKDGGQIEDLEVIRDGDHLVFLGADGL* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1667 875 Pfam Ion transport protein 51 295 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu3g1667 875 Pfam Ankyrin repeats (many copies) 644 685 IPR002110 GO:0005515
Pvu3g1667 875 Gene3D Jelly Rolls 332 492 IPR014710 -
Pvu3g1667 875 SMART cnmp_10 368 485 IPR000595 -
Pvu3g1667 875 SUPERFAMILY Voltage-gated potassium channels 45 289 - -
Pvu3g1667 875 MobiDBLite consensus disorder prediction 740 763 - -
Pvu3g1667 875 ProSiteProfiles Ankyrin repeat profile. 644 676 IPR002110 GO:0005515
Pvu3g1667 875 ProSiteProfiles KHA domain profile. 807 875 IPR021789 -
Pvu3g1667 875 SUPERFAMILY Ankyrin repeat 518 697 IPR036770 -
Pvu3g1667 875 Pfam Ankyrin repeats (3 copies) 520 607 IPR002110 GO:0005515
Pvu3g1667 875 PANTHER K+ TRANSPORTER 1-RELATED 7 870 - -
Pvu3g1667 875 Pfam Cyclic nucleotide-binding domain 388 473 IPR000595 -
Pvu3g1667 875 CDD CAP_ED 368 473 IPR000595 -
Pvu3g1667 875 ProSiteProfiles cAMP/cGMP binding motif profile. 368 470 IPR000595 -
Pvu3g1667 875 SMART ANK_2a 644 673 IPR002110 GO:0005515
Pvu3g1667 875 SMART ANK_2a 513 542 IPR002110 GO:0005515
Pvu3g1667 875 SMART ANK_2a 579 608 IPR002110 GO:0005515
Pvu3g1667 875 SMART ANK_2a 546 575 IPR002110 GO:0005515
Pvu3g1667 875 Pfam KHA, dimerisation domain of potassium ion channel 807 869 IPR021789 -
Pvu3g1667 875 PANTHER POTASSIUM CHANNEL AKT1 7 870 IPR045319 GO:0005249|GO:0006813
Pvu3g1667 875 ProSiteProfiles Ankyrin repeat profile. 546 578 IPR002110 GO:0005515
Pvu3g1667 875 PRINTS EAG/ELK/ERG potassium channel family signature 63 70 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu3g1667 875 PRINTS EAG/ELK/ERG potassium channel family signature 86 96 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu3g1667 875 PRINTS EAG/ELK/ERG potassium channel family signature 97 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu3g1667 875 PRINTS EAG/ELK/ERG potassium channel family signature 236 253 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu3g1667 875 PRINTS EAG/ELK/ERG potassium channel family signature 262 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu3g1667 875 PRINTS EAG/ELK/ERG potassium channel family signature 280 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu3g1667 875 Gene3D - 514 698 IPR036770 -
Pvu3g1667 875 SUPERFAMILY cAMP-binding domain-like 293 488 IPR018490 -
Pvu3g1667 875 Gene3D - 51 289 - -
Pvu3g1667 875 MobiDBLite consensus disorder prediction 731 763 - -
Pvu3g1667 875 ProSiteProfiles Ankyrin repeat region circular profile. 546 577 - -
Pvu3g1667 875 ProSiteProfiles Ankyrin repeat region circular profile. 644 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1667 Pvu-Chr3 36825775 36832504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1667 11 869 Ion Channels AT2G25600 62.442 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1667 K21867 - gmx:100819491 1558.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1667 3 36825775 36832504 Pvu3g1667 3 36825775 36832504 ECH