Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1661 ATGTATGGATATACAATTATATATTCTCATCTATCCTGCCTTCAAGTAGGAAGCCAAAAGAAGGTGAACTATTTGCCTCTGGAGGCATGTAAGATAGTTGGGGGCCAGAGATATACAAAAGGGCTTAACGAAAAGCAGATAACTTCTCTGCTAAAGGTCTCATGCCAGAGACCACGTGAACAAGAGACAGGCATTCTAAAGGCAATTCAACAAAATAATTATGAGTATAATCCCTATGTAAAGGAGTTTGGTATCAGCATCGATAGCAAACTTGCATCAGTTGAAGCTCGGGTTCTTCCTGCTCCATGGTTGAAATATCACGACACTGGAAGAGAGAAAGAACACTTGCAACAAGTTGGTCAATGGAACATGATGAACAAGAAAGTTATAAACGGAAGCATTGTAAGATATTGGGCATGTATCAATTTCTCACGAAGTATCCAAGAAATTGCTCGCGGGTTTTGCCAACAGTTGGTTCAAATGTGCCAAATCTCAGGCATGGAATTTAGTCTAGACCCTGTGATTCCTATATATTCAGCAAGACCTGATATGGTAAAGAAAGCCTTGAAGTACGTACATTCTGCTGTACGAGATAAACTAGGTGGGAAAGAACTGGAGTTGCTGATTGCCATTCTTCCAGACAACAATGGCTCTCTGTATGGTGATCTCAAAAGAATCTGCGAAACAGATCTGGGGTTGATTTCTCAGTGCTGCCTTTCAAAACACGTATTCAAGATCAATAGACAGTATCTGGCAAATGTTGCCCTAAAGATCAATGTCAAGTTGGGAGGAAGGAACACAGTTCTTTTAGATGCCCTAAGTTGGAGGATCCCATTGGTTAGTGACATTCCAACAATAATTTTTGGAGCTGATGTAACCCATCCAGAATCTGGAGAGGACCCTTGTCCATCCATTGCTGCTGTTGTAGCCTCCCAGGACTGGCCGGAAGTAACAAAGTATGCAGGATTAGTATGTGCTCAGCCTCATCGTGAGGAACTCATTCAAGATCTTTTTAAATGTTGGAAGGATCCTCATCATGGTATAGTTTATGGTGGCATGATCAGAGAGCTGTTACTCTCGTTTAAGAAGGCAAGAGGACAAAAACCGTTGAGAATAATATTTTACAGGTAA 1131 0.412 MYGYTIIYSHLSCLQVGSQKKVNYLPLEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETGILKAIQQNNYEYNPYVKEFGISIDSKLASVEARVLPAPWLKYHDTGREKEHLQQVGQWNMMNKKVINGSIVRYWACINFSRSIQEIARGFCQQLVQMCQISGMEFSLDPVIPIYSARPDMVKKALKYVHSAVRDKLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLSKHVFKINRQYLANVALKINVKLGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDPCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPHHGIVYGGMIRELLLSFKKARGQKPLRIIFYR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1661 376 Gene3D - 98 270 - -
Pvu3g1661 376 Pfam Piwi domain 208 376 IPR003165 GO:0003676
Pvu3g1661 376 Gene3D paz domain 1 40 - -
Pvu3g1661 376 ProSiteProfiles Piwi domain profile. 207 376 IPR003165 GO:0003676
Pvu3g1661 376 Gene3D - 276 376 IPR036397 GO:0003676
Pvu3g1661 376 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 375 - -
Pvu3g1661 376 Pfam PAZ domain 2 50 IPR003100 GO:0005515
Pvu3g1661 376 SMART Piwi_a_2 207 375 IPR003165 GO:0003676
Pvu3g1661 376 Pfam Mid domain of argonaute 120 193 IPR032473 -
Pvu3g1661 376 CDD PAZ_argonaute_like 2 33 - -
Pvu3g1661 376 Pfam Argonaute linker 2 domain 64 106 IPR032472 -
Pvu3g1661 376 ProSiteProfiles PAZ domain profile. 2 34 IPR003100 GO:0005515
Pvu3g1661 376 PANTHER PROTEIN ARGONAUTE 10 1 375 - -
Pvu3g1661 376 SUPERFAMILY PAZ domain 1 74 IPR036085 GO:0005515
Pvu3g1661 376 SUPERFAMILY Ribonuclease H-like 198 376 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1661 Pvu-Chr3 36731515 36734214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1661 1 376 Eukaryotic Initiation Factors Gene Family AT5G43810 75.597 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1661 K11593 - pvu:PHAVU_003G160200g 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2059 9 29544840 29560158 Pvu3g1661 3 36731515 36734214 PCT