Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1656 ATGGCGCTGCTCACAATTATCGTTTTCCTCCTCCAACTCACTTCTAATGTTCGAGTCAACTCGGAGCCGACTCAGGACAAGCAAGCGCTCCTTGCTTTCCTCTCCCAAACCCCACACTCCAACCGCCTCCAATGGAACGCTTCCGCTTCCGCATGCGACTGGGTGGGCGTCAAATGCGACGCCTCACGCTCCTTCGTCTACTCGCTCCGTTTACCCGCCGTCGACCTCGTGGGTCCGGTTCCACCCGCCACAATCGGTCGCCTCTCCCAGCTTCGGATCCTTAGTCTCCGTTCCAACGGCCTCACCGGCGAGATCCCGGGCGATTTCTCAAACCTCACCCTCCTCCGCAACCTCTACCTCCAGAAGAATCAGTTCTCCGGCGAGTTCCCTCCGAGTCTGACTCGCCTCACTCGACTCACTCGCTTGGATCTCTCCTCCAACAACTTCACCGGGCAAATCCCTTTCTCCGTCAACAACTTAACCCACCTCACTGGCCTCTTCCTGGAACACAACAGCTTCTCCGGAAAAATCCCTAGCATCACTGCCAAGCTTGTCGACTTCAACGTTTCCTTCAACCGCCTCAACGGTTCCATTCCGGAGACGCTCTCCACTTTCCCCAACTCCTCATTCGCCGGAAACATAGATCTCTGTGGCCCGCCGTTGACGGCCTGCAACCCCTTCTTTCCGGCTCCGGCGCCGTCTCCCTCCTCCAATTCAACCCCTACCAAGACGCATAAGTCCAAGAAGCTCTCCACGGGCGCCATTGTCGCAATCGTAGTCGGGTCCGTTCTCGTCGCGGCGTTGCTTCTTCTGCTACTGTTGCTGTGCCTCCGGCGCCGGCGCCGGCAGCCAGCGAAACCGCCGAAGCCTGTGGCGGCGGCGCGTGCCGTGGCGGTGGAGGCGGGGACGTCGTCGTCGAAAGAGGATATCACCGGGGGTTCGGCGGAAGCGGAAAGGAACAAGCTGGTGTTCTTCGAAGGGGGGATATACAGTTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTGTTGGGGAAGGGCAGCGTAGGGACTTCGTACAAGGCGGTGCTGGAGGAGGGTACGACGGTGGTGGTGAAGAGGCTGAAGGATGTTGTGGTGACGAAGAAAGAGTTCGAGTTGCAAATGGAGGTTCTGGGGAAGATTAAGCACGAGAATGTGGTGCCTCTCAGAGCCTTTTACTTCTCCAAGGACGAGAAATTGCTCGTTTACGATTACATGTCTGCCGGCAGCTTGTCTGCTCTCCTTCACGGGAGCAGAGGGTCTGGGAGAACACCACTGGACTGGGACAGCAGAATGAAAATAGCGGTAGGAGCGGCACGAGGGTTGGCATGCCTCCACGTGGCAGGCAAGGTGGTCCACGGCAACATAAAATCTTCCAACATCCTCCTCCGAGGGCCGGACCACGATGCCGGCGTTTCGGATTTTGGTCTAAATCCCCTGTTCGGGAACGGAGCCCCGTCGAACCGGGTGGCGGGTTACCGGGCACCCGAAGTGGTGGAAACTCGAAAGGTGAGCTTCAAGTCTGACGTGTACAGCTTTGGCGTCTTGCTGTTGGAGCTTCTAACGGGGAAAGCGCCGAATCAAGCGTCGCTGGGGGAGGAGGGAATCGACCTCCCGAGGTGGGTCCAGTCGGTGGTGCGCGAAGAGTGGACCGCGGAGGTGTTCGACGCGGAGCTCATGAGGTATCACAACTTCGAGGAGGAGATGGTTCAGCTCTTGCAAATCGCCATGGCGTGTGTTTCGGTGGTGCCTGACCAGAGGCCCAGCATGCAGGACGTGGTGCGCATGATCGAGGACATCAACCGGGGCGAGACCGACGACGGCTTGCGTCAGTCCTCCGATGACCCTTCTAAAGGATCCGAGGGTCACACTCCTCCCCCGGAGTCAAGAACTCCTAGGTCACTCACACCTTAA 1938 0.5846 MALLTIIVFLLQLTSNVRVNSEPTQDKQALLAFLSQTPHSNRLQWNASASACDWVGVKCDASRSFVYSLRLPAVDLVGPVPPATIGRLSQLRILSLRSNGLTGEIPGDFSNLTLLRNLYLQKNQFSGEFPPSLTRLTRLTRLDLSSNNFTGQIPFSVNNLTHLTGLFLEHNSFSGKIPSITAKLVDFNVSFNRLNGSIPETLSTFPNSSFAGNIDLCGPPLTACNPFFPAPAPSPSSNSTPTKTHKSKKLSTGAIVAIVVGSVLVAALLLLLLLLCLRRRRRQPAKPPKPVAAARAVAVEAGTSSSKEDITGGSAEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFELQMEVLGKIKHENVVPLRAFYFSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDSRMKIAVGAARGLACLHVAGKVVHGNIKSSNILLRGPDHDAGVSDFGLNPLFGNGAPSNRVAGYRAPEVVETRKVSFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNFEEEMVQLLQIAMACVSVVPDQRPSMQDVVRMIEDINRGETDDGLRQSSDDPSKGSEGHTPPPESRTPRSLTP* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1656 645 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Pvu3g1656 645 CDD STKc_IRAK 345 608 - -
Pvu3g1656 645 MobiDBLite consensus disorder prediction 607 645 - -
Pvu3g1656 645 MobiDBLite consensus disorder prediction 607 625 - -
Pvu3g1656 645 SUPERFAMILY L domain-like 25 207 - -
Pvu3g1656 645 SUPERFAMILY Protein kinase-like (PK-like) 343 608 IPR011009 -
Pvu3g1656 645 Gene3D Transferase(Phosphotransferase) domain 1 414 626 - -
Pvu3g1656 645 PANTHER OS05G0588300 PROTEIN 9 626 - -
Pvu3g1656 645 ProSiteProfiles Protein kinase domain profile. 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1656 645 Pfam Leucine rich repeat 80 125 IPR001611 GO:0005515
Pvu3g1656 645 Gene3D Phosphorylase Kinase; domain 1 305 413 - -
Pvu3g1656 645 Gene3D Ribonuclease Inhibitor 184 224 IPR032675 -
Pvu3g1656 645 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Pvu3g1656 645 Pfam Protein kinase domain 342 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1656 645 PANTHER OS05G0480400 PROTEIN 9 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1656 Pvu-Chr3 36647786 36651354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1656 26 626 Receptor kinase-like Gene Family AT5G58300 54.010 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu3g1656 Pkinase 5.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1656 - - gmx:100806857 1027.7