Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1644 ATGCCTTCTAATGTCATCGTTTTCTTCACTGTCTATCTCATCTTCATCTCTTTCAAATCTCACTCCTTTGCAGATAACCCTTCCTGGGTGAAAGCCGGTTATTACTATTCTGGCAGTGAAATTTCTGCTTCAGACATCAAAGCCACGCTTTTCACTCACCTCTTATGCGCTTTTGCCTTCATAAACTCCACCACCTACAACATCTCCATCAACTCTTCGGAGGAGCAAAAGTTCTCCACCTTCACCAACACGGTGAAGCTCCAAAACCCATCTGTTTCAACGCTTTTATCCATCTGGGGTGGCAAGAGGGACTCTTCGGTGTTCAACTCAATGCTAAATCAATCTTCTTACAGGAAGCTTTTCATTGATTCTTCCATCAGAACAGCCAGGTTCTATGGCTTTCACGGTATAGACCTTACTGGGGCGTGGCCAAGTTCCCAGGTTACCAATTTTGGAACCCTTTTGAAGGAGTGGCGTGCTGCAATAACTTCTGAGGCAAGAAACTCTACCAAGCCAGAGCTGTTGTTGGTGATGGCAGGTTACTACCTTAAGGCTTCGGACACCTTGAGTTACCCCTTCGATTCAATGCAGGAGAATTTAGATTGGGTGCACTTTGTGGCTTATGATTACTATCTCCCTAAGATGGACAATGTCACGGCTTTTCATGCGGCTCTGTATGGTTCATCTGATTGGAAAAACACTGATTCTGGCATCAGAGAGTGGAGGAGGAGGGGGTTCTCGTCTAAGAAGCTATTAATTGGGTTGCCTTATCATGGATATGCGTGGAAACTTGTGACTCCTGCACCAAACAGTGGCGTGGGAACCCCAGCTTCGGGACCAGCCGTCACAATGGATGGTTCCATGGCTTATAAGTTGATAAAGAGTTACATTAAATCCTTTGGAAATGGAGTTGTTTCACATTACAATGCAAGTTGTGTGGTGAACCAGTTTTGTGTTGCGTCCACCACTTGGGTTAATTTTGATGATGTGGAGGTCATCAGGGCCAAAGTTTCTTATGCAAAGGAAAATGGGCTACTTGGTTACAACGTGTTCCAAGTAGGCAATGACGAAAATTGGGAACTTTCAAGAGGGGCAGCTCAAGCTGTAGATGAAGAAATTGAAGATCATCACAAGAAGAGGTTGCTAATAATTGTTCTGCTTGCTACTTTGACTTTGGTGCTTCTGTTGGGAATTGTATTCTGCTACTACCACATAGAAAAGGATATCGATGCAAATGGTTCTGATTTGACAATATTCAGCTATCTCACTATTAAAGTGGCAACAAATAACTTCTCAAAAGATAATAGGCTTGGAGAGGGTGGATTTGGCACAGTGTACAAGGGCAAATTACGGAAGGGTCAGGAAATAGCTGTGAAAAGACTCTCAGAAACCTCAAATCAAGGCCCTGAAGAGTTCAAGAATGAAATCGCACTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTCTGATCTATGAATACCTGCAAAACAAAAGCTTAGATAATTTCCTCTTTGATCCAACGAAATCAATTCTTTTAGACTGGAACAAGCGTGTGAATATCATTGAAGGCGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTTACTATAATTCACCGAGATCTTAAATCTAGTAATGTTTTGCTAGATGAAAATATGAATCCAAAGATATCCGATTTTGGTATGGCTAGAATTTTCAGAAAGTATGACCTTGAAGCAAACACAGAAAGGATAGTTGGAACATATGGGTATGTACCTCCTGAGTACGTGAGAAAAGGCATATACTCAACCAAGTACGATGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGCGGAAAGAGGACTTCATGTTATTATGGCATGCATGAAAATATGACCCTTTTGGAATATGCATATGGGTTGTGGAGGGAAGGAAGAGGTGTGGAGTTTGTTGACCCTTCATTGGATGATACAACATCTCCTTGTAAAATCATGAGATGCATGCAGGTAGCTCTGCTGTGCGTTCAAGAGAACTCTGCAGATAGACCTTCCATGTTGGAAGTTGATTCACTGCTGAAGAATGATGGTGCAGTTATTGGTACTCCCAAAATGCCTGCCTTTTCAGTTCAGAAACGTGGAGATGAGGAAGAAACATCTCACAGCGGAATCAAATTTTATTCAATCAATGATGTTACAATTTCTCAACTGGCACCAAGATGA 2250 0.4169 MPSNVIVFFTVYLIFISFKSHSFADNPSWVKAGYYYSGSEISASDIKATLFTHLLCAFAFINSTTYNISINSSEEQKFSTFTNTVKLQNPSVSTLLSIWGGKRDSSVFNSMLNQSSYRKLFIDSSIRTARFYGFHGIDLTGAWPSSQVTNFGTLLKEWRAAITSEARNSTKPELLLVMAGYYLKASDTLSYPFDSMQENLDWVHFVAYDYYLPKMDNVTAFHAALYGSSDWKNTDSGIREWRRRGFSSKKLLIGLPYHGYAWKLVTPAPNSGVGTPASGPAVTMDGSMAYKLIKSYIKSFGNGVVSHYNASCVVNQFCVASTTWVNFDDVEVIRAKVSYAKENGLLGYNVFQVGNDENWELSRGAAQAVDEEIEDHHKKRLLIIVLLATLTLVLLLGIVFCYYHIEKDIDANGSDLTIFSYLTIKVATNNFSKDNRLGEGGFGTVYKGKLRKGQEIAVKRLSETSNQGPEEFKNEIALTARLQHVNLVRLLGYCTKRDEKILIYEYLQNKSLDNFLFDPTKSILLDWNKRVNIIEGVTQGLLYLQEYSNFTIIHRDLKSSNVLLDENMNPKISDFGMARIFRKYDLEANTERIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYGMHENMTLLEYAYGLWREGRGVEFVDPSLDDTTSPCKIMRCMQVALLCVQENSADRPSMLEVDSLLKNDGAVIGTPKMPAFSVQKRGDEEETSHSGIKFYSINDVTISQLAPR* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1644 749 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 745 - -
Pvu3g1644 749 ProSitePatterns Protein kinases ATP-binding region signature. 437 459 IPR017441 GO:0005524
Pvu3g1644 749 CDD STKc_IRAK 437 704 - -
Pvu3g1644 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Pvu3g1644 749 Gene3D Glycosidases 44 357 - -
Pvu3g1644 749 SMART serkin_6 431 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1644 749 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 372 IPR001223 GO:0005975
Pvu3g1644 749 ProSiteProfiles Protein kinase domain profile. 431 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1644 749 Gene3D Phosphorylase Kinase; domain 1 405 506 - -
Pvu3g1644 749 Pfam Protein tyrosine and serine/threonine kinase 433 699 IPR001245 GO:0004672|GO:0006468
Pvu3g1644 749 Gene3D - 257 327 IPR029070 -
Pvu3g1644 749 SUPERFAMILY Protein kinase-like (PK-like) 415 720 IPR011009 -
Pvu3g1644 749 SMART 2g34 29 356 IPR011583 GO:0008061
Pvu3g1644 749 SUPERFAMILY (Trans)glycosidases 29 366 IPR017853 -
Pvu3g1644 749 CDD GH18_plant_chitinase_class_V 27 362 - -
Pvu3g1644 749 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 19 745 - -
Pvu3g1644 749 Gene3D Transferase(Phosphotransferase) domain 1 507 708 - -
Pvu3g1644 749 Pfam Glycosyl hydrolases family 18 34 356 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1644 Pvu-Chr3 36408967 36412280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1644 419 749 Receptor kinase-like Gene Family AT4G11530 50.733 1.32e-113 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu3g1644 Glyco_hydro_18 3.7e-55 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1644 - - aprc:113847882 1182.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1644 3 36408967 36412280 Pvu3g1644 3 36408967 36412280 ECH