Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1643 CCTATGGGACGACGTTTGTTAGATTGGAATAAGCGCGTTGATATCATTGAGGGAGTTACGCAAGGTCTTCTTTATCTTCAAGAATATTCGAGATTCACCATAATTCATAGAGACATAAAAGCTAGCAATATTTTGTTAGACGCAGAGATGAAGCCAAAGATTTCAGACTTTGGGATGGCAAGAATATTCACAAAAAATGAACAAGAGGCAAATACTAGCAAGATTGTGGGAACATATGGTTATGTTCCTCCTGAATACGTTAGAGAAGGTGTGTACTCCACTAAATCTGATGTATATAGCTTTGGAGTGCTACTTCTACAAATTATAAGTGGCAAGAAGACACATGGTTTGTACAGAGAGAACGAAGATTTAAGGCTCTTGGAGTATGCATATGAGTTATGGAAAGAAGGAAAGGGTATGGAGCTGATGGATGATTTACTTGACGATACATGTTCAGAGTGCAAACTAGTGAGATGCATGGAAATTGGTTTGTTATGCGTCCAAGAACATGCAAGTGATAGGCCTTCAATGCTAGAAGTTTGTTCAATGTTGAGAAACGAAAACAAATCTCAAGCCATCCCCAAAAAACCAGCATTTTCAAGAGTGCAAGACAAAGATGATGATGTAAATGAGTGGCAACCGTTACAAAATATTTCAGTCGATGGTGGAGTCGTCACCGAAACTGAAATGGTAGGCAGGTAG 702 0.3903 PMGRRLLDWNKRVDIIEGVTQGLLYLQEYSRFTIIHRDIKASNILLDAEMKPKISDFGMARIFTKNEQEANTSKIVGTYGYVPPEYVREGVYSTKSDVYSFGVLLLQIISGKKTHGLYRENEDLRLLEYAYELWKEGKGMELMDDLLDDTCSECKLVRCMEIGLLCVQEHASDRPSMLEVCSMLRNENKSQAIPKKPAFSRVQDKDDDVNEWQPLQNISVDGGVVTETEMVGR* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1643 233 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 221 - -
Pvu3g1643 233 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1643 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 34 46 IPR008271 GO:0004672|GO:0006468
Pvu3g1643 233 Gene3D Transferase(Phosphotransferase) domain 1 2 209 - -
Pvu3g1643 233 SMART serkin_6 4 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1643 233 Pfam Protein kinase domain 12 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1643 233 SUPERFAMILY Protein kinase-like (PK-like) 4 211 IPR011009 -
Pvu3g1643 233 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19 2 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1643 Pvu-Chr3 36406666 36407558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1643 1 199 Receptor kinase-like Gene Family AT4G11480 51.000 2.15e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu3g1643 Pkinase 2.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1643 - - vun:114175226 401.364