Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1638 ATGGAGGAGGAAGACCATTTTCCTGTGGGTTTGCGTGTACTTGCCGTTGACGACGACCGAACGTATCTTACAGTGTTGGAGAATTTGCTTCGCAAATGCCAGTATAATGTTACTGCTACCACTGAAGCAGTCAAGGCGCTAGAAATGCTGAGGAAAAACAGAAACATGTTTGACCTTGTTGTCAGTGATGTGAATATGCCAGAAATGGATGGGTTTAAGCTGCTTCAGCATGTGGGACTTGAGACGGACCTACCCGTTATCATGTTGTCAGGATATGGTGACAAAGAGCGGGTGATGAAAGGTGTCATATATGGTGCATGTGACTTTTTAACGAAACCAGTTCGAATTCAGGAGTTGCAGAACATATGGCAACATGTAGTGCGGAGGAAGATTGATGGCAAGGATAAGAATAAGACAGCAAGTGAGGAAATAAACTGCAGTATGTCTGGTAAGGTTGCAAATGAGGAGGAACCATGCACTATTGCTGGGGAATGTAGTCAAGCTTTGGAACCAAAAACTAATGCTGACCAGAATATAAAAGGGGATCGTAAAAGGAAAGAACGGTGTGAGGCTGAGGAAGTGGAAGAAGATGATAAAGAGAACGATGAACCCTCCAATCACAAGAAATCTCGTTTAGTTTGGGATGCCGAGTTGCACAATAAATTTCTTGCTGCCATTAATCAGCTGGGAATTGAAAAGGCTTTCCCCAAGAAGATACTTGACTTGATGAATATTGATGGACTTTCAAGAGAAAACGTAGCAAGCCATCTCCAGAAATTCAGACTCGGTCTCAAAAAGCCAAATCCTTACCACCGTATGGGTTCAGTTGATTGCTTTCGCCCTTCATCTGAATCAGGATCCATGTTAAGCACCACATTACCGTCATATGCATATGCACCTGGTGGAAGGTTTGGGGTGTTAAACGCTCCATCCAGCTTGAACACCAGAGGAATGAACTCATCTGCAATTGTTCAAGCTGCTCAGTCTCTAAACATCAACAGCAGCAGCATAAAAACACATGGAAACATGCACTCGTCCATATTTTCTGCAAATCAAACCTCAAGCTTATTGCAGGGCATTCCAACATCAATCGAGGCTAACCAATTTAAGCCCAACAACTCTCCAGCTGGTATTAGGAGGTTTAATCTACTTGATCGCTCAACTGGATTTAAAGATTTCTCTAGTTTCTCGGAAAATAGAGCCACTGTTAGAAATGCAGCGAATGTTTCTCTTCCTGGTTTCTCAAATAACCATTTACTTTTTCAAGGAATTTCCCAACTCACACATCATTCTGAACCATTTAGAAATCATTCTTCTTTTGGATCTGCTTCTGTGAAAGCACAATCTTTTGATCCAAACTCCTGTGGTTGGCCTAAAATGGGGGATGATTATAATAATAAAAGCTGGCAGGGAGCAGCTCCGATATCTATCTTTCCTTCCAGTACTTCTGCTGTCAGTAACGTTTTCAATGATGATCAACTGCTTCAGCATAACTTCAAATTGTCCCCATCCACTTTTTGCAGTAGGAACAGCCCAGTTGGTTTTTCTTCCAGTGTTCCTTTGGAGGATGATGTCCTAGGCGAGATGCTACAGCAAGAAGGCTTACATGGGAATATCTTACTAGCTTCATCTTACACCCAGCATAACAAGGGAGGTTGCAGCAAAGACACAAGTCAAACCTTCAATTCCATAAATCCTGTCATTTCTCCTAACGGAGGCACTAGTTCCTTGGGACATTGCTATGACCAAAATAATGCAGTTGACAATAAGAGTATTGATGCATCTTTGGTTGGCCAAATGAATGGGGTTAATCCATCAATCACACAGTCTAGTGAAGGTGAGAATTTCTATTCAATGAAGTCAAATGATGAGTACGTTTTGCCGAGCCTGAAGTCCGGTGAAGGACTCCTGCATAATGGTTTGGAGTCCTTGGATGAGATAATGAATGAAATAGACGAACAGGAGCTAAATGCGATTATGTTGATGGATGGAGGAATAGAGTTTGATGCTTACAATGATGGATCATGCAAGTGA 2034 0.4208 MEEEDHFPVGLRVLAVDDDRTYLTVLENLLRKCQYNVTATTEAVKALEMLRKNRNMFDLVVSDVNMPEMDGFKLLQHVGLETDLPVIMLSGYGDKERVMKGVIYGACDFLTKPVRIQELQNIWQHVVRRKIDGKDKNKTASEEINCSMSGKVANEEEPCTIAGECSQALEPKTNADQNIKGDRKRKERCEAEEVEEDDKENDEPSNHKKSRLVWDAELHNKFLAAINQLGIEKAFPKKILDLMNIDGLSRENVASHLQKFRLGLKKPNPYHRMGSVDCFRPSSESGSMLSTTLPSYAYAPGGRFGVLNAPSSLNTRGMNSSAIVQAAQSLNINSSSIKTHGNMHSSIFSANQTSSLLQGIPTSIEANQFKPNNSPAGIRRFNLLDRSTGFKDFSSFSENRATVRNAANVSLPGFSNNHLLFQGISQLTHHSEPFRNHSSFGSASVKAQSFDPNSCGWPKMGDDYNNKSWQGAAPISIFPSSTSAVSNVFNDDQLLQHNFKLSPSTFCSRNSPVGFSSSVPLEDDVLGEMLQQEGLHGNILLASSYTQHNKGGCSKDTSQTFNSINPVISPNGGTSSLGHCYDQNNAVDNKSIDASLVGQMNGVNPSITQSSEGENFYSMKSNDEYVLPSLKSGEGLLHNGLESLDEIMNEIDEQELNAIMLMDGGIEFDAYNDGSCK* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1638 677 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 265 IPR017930 -
Pvu3g1638 677 MobiDBLite consensus disorder prediction 176 192 - -
Pvu3g1638 677 SUPERFAMILY CheY-like 10 131 IPR011006 -
Pvu3g1638 677 SMART REC_2 11 123 IPR001789 GO:0000160
Pvu3g1638 677 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 657 - -
Pvu3g1638 677 CDD REC_typeB_ARR-like 13 127 - -
Pvu3g1638 677 MobiDBLite consensus disorder prediction 173 208 - -
Pvu3g1638 677 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 657 IPR045279 GO:0009736
Pvu3g1638 677 PIRSF RR_ARR_type-B 1 676 IPR017053 GO:0003677|GO:0003700|GO:0009736
Pvu3g1638 677 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
Pvu3g1638 677 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 262 IPR006447 GO:0003677
Pvu3g1638 677 Gene3D - 11 145 - -
Pvu3g1638 677 SUPERFAMILY Homeodomain-like 207 266 IPR009057 -
Pvu3g1638 677 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
Pvu3g1638 677 Gene3D - 205 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1638 Pvu-Chr3 36343440 36347544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1638 1 428 Response Regulator Gene Family AT2G25180 42.601 1.82e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu3g1638 Response_reg 5.7e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1638 K14491 - vun:114177568 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1638 3 36343440 36347544 Pvu3g1638 3 36343440 36347544 ECH