Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1634 ATGAGCAGAAGACCCCCACTCCCTCGTCTCCTCCTTAATAATGTCTCTTGTATGAGAAATGCACAGCAAGTTCTGCGTCATGTGAATGTCTCTCTTCATGATGGAGGGGCGCTTGTGCTAACAGGCGCAAATGGATCGGGGAAGACAACTTTCCTGCGTATGTTAGCTGGGTTTTCACGTCCTTCTGCTGGTCAAATCCTTTGGAATGGGCATGACATTCAACAATCCGCAATATTCCACCAATATAAGCTTCAGCTTAACTGGCTCTCTCTCAAGGACGCCATTAATGATAAGTTCACAGTTCTCAACAATGTACAATGGTTTGAACTTCTTGAGAACAAGGAAGGGAAGGCTATGGCTGCTGTGGAGTTGATGGGACTAGGAAGATTAGCGAAAGAAAAACCAAGGATGCTTTCTATGGGCCAGCGCAAAAGACTACAAATTGCCAGGTTGCTGGCAATTGATCGCCCCATATGGTTGCTAGACGAACCTTCAGTTGCATTAGACGAAGAGGGTGTAAAGTTACTTGAGTATATCATCGCAGAACATAGGAAACACGGAGGAATTGTGATTGTGGCGACTCATCTACCCATTGAGATGGAAGATTCCATGGTTTTGAAACTTCCACCAAGGTTTCCAAGGAGGATGACCCATGTGGATATGCTTGATCGGGCGGATATCAGCTAA 687 0.4556 MSRRPPLPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALVLTGANGSGKTTFLRMLAGFSRPSAGQILWNGHDIQQSAIFHQYKLQLNWLSLKDAINDKFTVLNNVQWFELLENKEGKAMAAVELMGLGRLAKEKPRMLSMGQRKRLQIARLLAIDRPIWLLDEPSVALDEEGVKLLEYIIAEHRKHGGIVIVATHLPIEMEDSMVLKLPPRFPRRMTHVDMLDRADIS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1634 228 SMART AAA_5 34 222 IPR003593 -
Pvu3g1634 228 Gene3D - 7 207 IPR027417 -
Pvu3g1634 228 Pfam ABC transporter 25 165 IPR003439 GO:0005524
Pvu3g1634 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 197 IPR027417 -
Pvu3g1634 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 227 IPR003439 GO:0005524
Pvu3g1634 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 8 222 IPR005895 GO:0017004|GO:0022857
Pvu3g1634 228 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 12 208 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1634 Pvu-Chr3 36321770 36323553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1634 23 177 Calmodulin-binding Proteins AT2G36910 28.070 5.39e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1634 - - gmx:100796586 423.32