Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1625 ATGAGTGAGAAAGAGAAAGAGAAAGAGAAAGGGGTGAGCGAGGGATCGACGTTGTTGCACGGAAAGTACGAGCTGGGGAGGGTGTTGGGGCATGGAACGTTCGCGAAGGTGTACCACGCGCGGAACCTGAAGACGGGGCAGCACGTGGCGATGAAGGTGGTGGGGAAGGAGAAGGTGATAAAAGTGGGGATGATGGAGCAGGTAAAGAGGGAGATCTCGGTTATGAAGATGGTGAAGCACTCAAACATCGTGGAACTCCACGAAGTCATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTGCGCGGCGGAGAGCTCTTCAACAAGGTCTCCAAAGGTCGGTTGAAGGAGGACGTCGCCAGACTCTACTTCCAGCAGCTGATTTCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTCCTCCTCGACGAACACGGCAAGCTCAAGGTCTCCGACTTCGGACTCACCGCCTTCGCCGACCACCTCAAAGAGGATGGGCTGCTGCACACCACGTGCGGCACGCCCGCGTACGTGTCGCCGGAGGTCATAGCGAAAAAAGGGTATGACGGTGCCAAGGCTGATATATGGTCATGTGGGGTCATCCTCTACGTACTCCTCGCAGGGTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGTATAAGAAAATTTACAGAGGGGACTTCAAGTGTCCACCTTGGTTTTCCGTCGAGGCGCGAAGGCTTGTTACCAGACTCCTCGACCCCAACCCGAATACCCGGATCAGTATCTCTAAAGTCGTGGAGTCTTCCTGGTTTAAGAAACCGGTGCCGAGAAAGGTGGAAGACGTGGCGGAGATGGATTTGGAAGAGAAGTGTGAGACGCCCGCCACCATGAACGCGTTTCACATAATCTCGTTGTCAGAGGGGTTCGATTTGTCGCCCCTGTTTGAGGAGAAGAAGAGGGAGGAGATGAGGTTCGCGACGGCTGGGACGCCCAGCAGCGTGATATCGCGGCTAGAGGAGGTGGCGAAGGCGGGGAAGTTCGATATGAAAAGTAGCGAGACGAAGGTGAGGCTTCAGGGGCAGGAGCGTGGGAGGAAGGGAAAGCTGGCGATTGCGGCGGATATTTACTCCGTGACTCCGTCGTTTATGGTGGTTGAAGTGAAGAAGGACAATGGGGATACCTTGGAGTACAACCAGTTCTGCAGCAAGCAGCTTCGTCCTGCGCTTAAAGACATCTTCTGGAATTCCCCACAGAATTCCACACCTGCCATAGTGCTTGAATGA 1302 0.5492 MSEKEKEKEKGVSEGSTLLHGKYELGRVLGHGTFAKVYHARNLKTGQHVAMKVVGKEKVIKVGMMEQVKREISVMKMVKHSNIVELHEVMASKSKIYIAMELVRGGELFNKVSKGRLKEDVARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGKLKVSDFGLTAFADHLKEDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSVEARRLVTRLLDPNPNTRISISKVVESSWFKKPVPRKVEDVAEMDLEEKCETPATMNAFHIISLSEGFDLSPLFEEKKREEMRFATAGTPSSVISRLEEVAKAGKFDMKSSETKVRLQGQERGRKGKLAIAADIYSVTPSFMVVEVKKDNGDTLEYNQFCSKQLRPALKDIFWNSPQNSTPAIVLE* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1625 433 Gene3D Phosphorylase Kinase; domain 1 17 102 - -
Pvu3g1625 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Pvu3g1625 433 SUPERFAMILY Protein kinase-like (PK-like) 20 290 IPR011009 -
Pvu3g1625 433 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1625 433 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1625 433 CDD STKc_SnRK3 22 276 - -
Pvu3g1625 433 Gene3D Kinase associated domain 1, KA1 297 421 - -
Pvu3g1625 433 Pfam NAF domain 300 356 IPR004041 GO:0007165
Pvu3g1625 433 CDD CIPK_C 304 416 - -
Pvu3g1625 433 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 6 18 423 - -
Pvu3g1625 433 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Pvu3g1625 433 PANTHER - 18 423 - -
Pvu3g1625 433 Gene3D Transferase(Phosphotransferase) domain 1 103 281 - -
Pvu3g1625 433 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1625 433 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1625 Pvu-Chr3 36218742 36220895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1625 6 429 CBL-interacting serine-threonine protein kinases AT4G30960 72.398 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu3g1625 Pkinase 1.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1625 - K07198 var:108321114 825.469