Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1619 ATGGCTGAGCGCCGCAGCCCCCAAGCTCTCCCAGAGCCACACCCCAAGCCAAACGATTCTGACCGAGAACCGCACGACGCCAACCAAACACAACGACTCACCGAATCGCCCTCCGCCGCCGAGTCGCAGCGCGTCGAGTTACGGAGTTCTGACGAGCGTCGTACGGAGTCCAATTTAGAAACCCTAGGCGGTGCTGTTACCTCTTCGGTTCAAACCCTTGCTGTGCAGCACCATCGCAGTGACGATTTGCAAGGGAGCTCTGCTGCGTCGAATTCCAGTGGCAAAGCCGAAAGTAAGGAGACAGTTGCACCTCCTGAAAAAGAAATTATTCAAAGAGGAGCAGCCCAGCCACTTCCAACTCAGACAAATCGGCTTCAGCTGTCTGTGTGTTCAACTCCATTGTCTGAACTACCACCAGCTTCTGTTACACAATCTTTATCATCTGTTTCTAGTCCAACTGCACCAAAACAAAAATTATCTACTCCAAAGGTCAATAATGCACATTTGCCAGAAGTAGATAAGAAAAATCCTTCCGGTGGCAAAGCCTTATCTGCTGTTTCTGTTGCGAGGTCATCAGCATCTGATGGATATAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGCACTCATTCAGACTGTTTTGCTAAGAAGATTGAATGCTGTGATCATTCTGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCATAGTCATGATCCCCCACGGAAGACTAATTCTCTTAGGGAAAATAAGTTTCTGTCTGCCAGTGAACCTATTGTAGAAAACAGTGTTCCAGATCAGCCTGTCAGACTTCTGAAGGATCCCGATCCATCTATTTCTTCAAAAGAATCTCTACAAGGACCCTGCAGCTCTGATAAGAAACGGCCAAACTCATCTAGTATCAGTGGTAATGGTAAAGTTATTTTGAAAGAGGAACATGTAAATGAGCCAGAACCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGACATGGATTCTCCTGTAAAACCTGGAAAGAAGCCCAAGTTTGTCATACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAATCCGCATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTAGAAAGCACATTGAATCTGCCGTAGATAACTCAGATGCCGTCATTATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAAAAACGACATGGGCCACCAAGTGCTCCTCTTGTGGCAGCTGCAGCACCCACCTCCATGAACAGTTTACAGGTGAAGAAACCCGATTCCCCACATAACAAGAAAGTTTCTACTCAATGGTCCGTGGACACCGAAGGAGAACTAACTGGGGAAGCCCTGGAGCTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1515 0.4693 MAERRSPQALPEPHPKPNDSDREPHDANQTQRLTESPSAAESQRVELRSSDERRTESNLETLGGAVTSSVQTLAVQHHRSDDLQGSSAASNSSGKAESKETVAPPEKEIIQRGAAQPLPTQTNRLQLSVCSTPLSELPPASVTQSLSSVSSPTAPKQKLSTPKVNNAHLPEVDKKNPSGGKALSAVSVARSSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCFAKKIECCDHSGHVIEIVYKSEHSHDPPRKTNSLRENKFLSASEPIVENSVPDQPVRLLKDPDPSISSKESLQGPCSSDKKRPNSSSISGNGKVILKEEHVNEPEPKKRMKKGDLTDMDSPVKPGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPTSMNSLQVKKPDSPHNKKVSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1619 504 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 502 IPR044810 GO:0003700
Pvu3g1619 504 MobiDBLite consensus disorder prediction 320 350 - -
Pvu3g1619 504 MobiDBLite consensus disorder prediction 1 185 - -
Pvu3g1619 504 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 1 502 - -
Pvu3g1619 504 MobiDBLite consensus disorder prediction 268 352 - -
Pvu3g1619 504 ProSiteProfiles WRKY domain profile. 360 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 MobiDBLite consensus disorder prediction 60 98 - -
Pvu3g1619 504 MobiDBLite consensus disorder prediction 290 316 - -
Pvu3g1619 504 ProSiteProfiles WRKY domain profile. 188 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 SUPERFAMILY WRKY DNA-binding domain 191 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 SUPERFAMILY WRKY DNA-binding domain 361 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 MobiDBLite consensus disorder prediction 15 29 - -
Pvu3g1619 504 MobiDBLite consensus disorder prediction 115 164 - -
Pvu3g1619 504 MobiDBLite consensus disorder prediction 30 44 - -
Pvu3g1619 504 Pfam WRKY DNA -binding domain 367 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 Pfam WRKY DNA -binding domain 195 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 Gene3D WRKY domain 180 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 Gene3D WRKY domain 351 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g1619 504 SMART WRKY_cls 365 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1619 Pvu-Chr3 36109027 36115421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1619 128 504 WRKY Transcription Factor Family AT4G30935 56.736 9.77e-134 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu3g1619 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1619 - - gmx:100127377 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1619 3 36109027 36115421 Pvu3g1619 3 36109027 36115421 ECH