Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1605 ATGCAGCAGAGTGATCAGACGGTGTTGAGTTTGAGGCCCGGCGGTGGAAAAGGCAGCAGACCCCTCGGCCCTCGATTCGACTCCTCCACCTCGTCTTCTGCTTCCCCTGCTTTTGGCTCTTTTTCTTCTGATCTTCCTCTCCTGCGTCCCCATGGCGGGGCTCCCTCTCCTTTCTCTATCAAGGCTGGAGATTCACGGTTTGAGGGCCGTGAGCGCGTGCGATATACCAGGGAACAACTTTTACAACTCAGTGAGGGAGTTGAGATTCTTGATGATGTTTTGAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGCCCGCCCAGAAAGCAATCCCTCAAATCAATTTCAAAATCGATATTCTGAGCCAGATAATCGTGACTGGCGTGGACGATCTGCTGGCCAACCTTTTGGTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAAGGAGTTTGGAAATAATCGTCAAGACCAAATGAATTCTCAGTTTGCAAGGGCACAGATATCTTCTAACCAAGGGGGCGGACCTACTCCAACACTAGTCAAGGCTGAGGTGCCGTGGTCAGCTAGAAAGGGAACTCTCTCTGAAAAGGATCGTGTCTTAAAGACAGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATCTCTTGAAGGGTCAGTTGATTGATTCTGGCATTACATCTGCCGACATATTGAAGGGAGTTATATCACTGATATTTGATAAGGCAGTGCTAGAACCAACATTTTGCCCAATGTATGCCCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGATGAGCCTGGTGGGAAGGAAATCACTTTTAAGAGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAACCTGAGGGAAGAAGTGAGACAGATGATTGCTCCTGAGCAGGAGATGGAGCGAAGGGATAAGGACAGACTTGTCAAGATTCGAACCCTTGGAAACATTCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCCGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGTCCTGCTGACAGCAAGATCTGTCCAGCAGAGGAAAATGTTGAAGCCATTTGTCAATTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCGAAATCACGGCGTATAAATGATATGTACTTCAGTCGTTTGAAAGAATTGAGCACCAATCCCCAACTTGTTCCACGGCTGCGGTTTATGGTTCGTGATGTTCTAGAGTTGCGTTCTAATAACTGGATTCCTAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAGCATGAGAAGTAGCCGTGTAGTTTCTGGTGTTCAAGGAAACGTCAATTCAGGAGGATTTGCAATTGCCCGACCTGGTACCGGCGGTATGATGCCTGGGATGCCGGGGACGAGGAGGATGCCTGGGATGCCGGGAATTGATAATGACAACTGGGAGGTGCCTAGGACAAGATCAATGCCGAGAGGAGACATGTCAGGCATGCAAACTGGAGGACGTGGTCAGTCTCCTTTCATTTCTAAGACATCAACTGTTAATTCAAAGTTACTACCTCAAGGTAGTGGTGGTACTATAAGTGGGAGAAGCAGTGCCCTGGTACATGGGGGTGGTGGTGCTCCTTCTGCTCGTCCACAAAACATTGGTGTTAGTGCCGAGCCCCCACCTCAAATTCCTTCACCTGTACCTGTTAAAGTTGTTTCTGCCATACCCTCTGAGAAGCCACAAGCTCCAGCTCCAAAATTGAATGTTGAGGAACTTCAGCGCAAAACTAGTTCTCTTCTGGAGGAATATTTCAGTGTTCGGCTTTTGGATGAGGCATTGCAGTGTGTGGAGGAACTAAAAGCTCCAACTTATCACCCTGAGGTTGTGAAGGAAGCCATTTCCCTTGGACTAGATAAAAGTCCGCCATGTGTTGAACCTGTTGGCAGTCTTATTGAGTATCTGTATGTTAAAAAGATTCTTTCAGCCAGAGACATAGTGACTGGGTGCATGTTATTTTCTTCTCTGCTGGATGATATCGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAATAGGGAAACTAGTTTTGGCTGGGACTTTGGATTTTAAGATGGTAAGAGAAATCCTGAAGAAGGTGGAGGATGACCGGTTCCAGAAAACAATATTTTCCTCTGCATTGCAGGTAATTAGCTCTGCATCTGGGCAAGCTGTGTTGGAATCGCAAGCATCTGATATTGAGGCCTGTCAGAGTCTGTTCAACTGA 2373 0.4564 MQQSDQTVLSLRPGGGKGSRPLGPRFDSSTSSSASPAFGSFSSDLPLLRPHGGAPSPFSIKAGDSRFEGRERVRYTREQLLQLSEGVEILDDVLKIKQDIEAELFGEDQSWARPESNPSNQFQNRYSEPDNRDWRGRSAGQPFGNADERSWDNLKENKEFGNNRQDQMNSQFARAQISSNQGGGPTPTLVKAEVPWSARKGTLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADNLREEVRQMIAPEQEMERRDKDRLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPADSKICPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLVPRLRFMVRDVLELRSNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRSSRVVSGVQGNVNSGGFAIARPGTGGMMPGMPGTRRMPGMPGIDNDNWEVPRTRSMPRGDMSGMQTGGRGQSPFISKTSTVNSKLLPQGSGGTISGRSSALVHGGGGAPSARPQNIGVSAEPPPQIPSPVPVKVVSAIPSEKPQAPAPKLNVEELQRKTSSLLEEYFSVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKSPPCVEPVGSLIEYLYVKKILSARDIVTGCMLFSSLLDDIGIDLPKAPNNFGEIIGKLVLAGTLDFKMVREILKKVEDDRFQKTIFSSALQVISSASGQAVLESQASDIEACQSLFN* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1605 790 SMART if4_15 210 436 IPR003890 GO:0003723|GO:0005515
Pvu3g1605 790 MobiDBLite consensus disorder prediction 24 40 - -
Pvu3g1605 790 SUPERFAMILY ARM repeat 203 438 IPR016024 -
Pvu3g1605 790 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 789 IPR045208 GO:0003743
Pvu3g1605 790 Gene3D - 618 785 - -
Pvu3g1605 790 MobiDBLite consensus disorder prediction 108 149 - -
Pvu3g1605 790 Pfam MIF4G domain 210 436 IPR003890 GO:0003723|GO:0005515
Pvu3g1605 790 ProSiteProfiles MI domain profile. 625 747 IPR003891 -
Pvu3g1605 790 SUPERFAMILY ARM repeat 619 777 IPR016024 -
Pvu3g1605 790 Gene3D - 201 437 - -
Pvu3g1605 790 Pfam MA3 domain 626 738 IPR003891 -
Pvu3g1605 790 MobiDBLite consensus disorder prediction 1 63 - -
Pvu3g1605 790 MobiDBLite consensus disorder prediction 112 127 - -
Pvu3g1605 790 SMART ma3_7 626 738 IPR003891 -
Pvu3g1605 790 MobiDBLite consensus disorder prediction 526 546 - -
Pvu3g1605 790 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1605 Pvu-Chr3 35979872 35985656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1605 1 788 Eukaryotic Initiation Factors Gene Family AT5G57870 67.001 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1605 K03260 - gmx:100781275 1335.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1605 3 35979872 35985656 Pvu3g1605 3 35979872 35985656 ECH