Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1568 ATGCGAAATATCAACTCCGTCAAGCAAGAATTCCTCAAAAAATGGATATGGTGTCTCAGAAAATATAGCTCTCAAAAGAAGAACATGAGTCTTTTGGAGAGAAAGAAAGCCATAAAGCTGTCAGCAGATTTGGCCATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAAGGCCCTCATAGCCAATGCTTCCAAAAATAGCAGCAACAAAGTCCTCACGGCACACGTGCCAGGCTCATCACCACCACAGAGGGTAAGGAAAAGCTCCACGAATTATTCCCACAGCACAAGGATCAGAAGCTGCAGAAGAAACCGCGCAGTCTACAGACCAAGGGATAGGGTGGTGGCGAGTTTCATTGCGAAAAAACTGGTCCAGAAGAGAACGCGAAGGCTCAAGAGTCTCTTACCAGGAGGAGAATTCATGGATGATGCGTCTCTGGTTGAGGAAACCCTAGATTATGTACAATCACTGCGAGCTCAAGTTGAAGTAATGAGATGTCTCGTGACTGCCTCAGAGCTCATGATCCTAAATCCATCGTAA 543 0.4641 MRNINSVKQEFLKKWIWCLRKYSSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKALIANASKNSSNKVLTAHVPGSSPPQRVRKSSTNYSHSTRIRSCRRNRAVYRPRDRVVASFIAKKLVQKRTRRLKSLLPGGEFMDDASLVEETLDYVQSLRAQVEVMRCLVTASELMILNPS* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1568 180 MobiDBLite consensus disorder prediction 71 95 - -
Pvu3g1568 180 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 171 IPR044660 GO:0006355
Pvu3g1568 180 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 171 - -
Pvu3g1568 180 CDD bHLH_AtIBH1_like 122 169 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1568 1 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 40.113 4.79e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1568 - - ccaj:109811886 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1568 3 35461893 35463368 Pvu3g1568 3 35461893 35463368 ECH