Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1535 ATGTGTAATAAAGGGTTTCAATGCTTGAACGAGTGTGAGAGTGAAATTGATCATAGTCGAGAATTCTTCGTCATGGATAGTCCAAATCGATCGCCAGCTGCCGGCGAAGATAGCCGGCGTGTTAAGTTCTTGTGCAGCTTTCTGGGTGGCATAATGCCCCGTCCCCAAGATGGGAAGCTGCGGTATGTCGGTGGCGAGACACGAATTGTGAGTGTTTATCGAGAGATTAGCTATGAGGAGTTGATGGGGAAGATGAGAGAGTTGTATGATGGGGCTGCTGTATTGAAGTACCAGCAGCCTGACGAGGATCTTGATGCTCTTGTTTCTGTTGTCAATGATGATGATGTGGTTAACATGATGGAGGAGTATGACAAGTTGGGCTCAGGGGATGGATTCACCAGGCTCAGGATATTTTTGTTTTCACAATCCGAGCAGGATGGTTCCTCACATTTCATTGATGGGGATGATTCTGAGAGGAGGTATGTTGATGCATTGAATAGTTTAAATGATGTTGCTGACTTTAGGAGGTTGCAACAAGGAGAGTTTCCTATGATTAGCCCTGTTGAGGATATCCATGTGGCTGCTGATCAATTTTTTAATCCAATGAGTGTGGAAAGTGGGATTCATAGTCACAGAAGTGGGGAACTATCTATGTCACCGTATAATATGCATCATCTCTCGATCCAGCACCCGCAAACCATGGGCCCAAGGTATACTGAAATGGATTCTCCTTGGAATCCTGCTTATTACTCTCCTAGGCACCATGGTCTCCACGACTCCAGATCATTGGTTGAATTTCCATCTTCGCCGTCTAGTAGATACCGAATGCCATTTCCGGAGTTACCAGACAAGTGCATTGATAGAGGGCCGGAAGAGTATGCTCGACATCATGTAAATCACCATCCTGTGTATGATAATCAACCGCAGTATGCTGATAATGTTTTGTGGGTGCCGACTGGAGCAGCACATTGTGAAAAGGCAGGTTTTCCGGGCAATATTGTTCATGGTTCCCATGTTGTTGATGGGAACAGCATATGTGAGCAGTGTCGCATGGGTTTTCATAGAGGTCAACCACATCTGGAGCATTCTAACGTAAGTAATGGACTTCCACCGGTTGCTAATCCATGCGGAGAATGCCCCCTGCCAAATAGGGATGCTTTCCCCATAGTTGATGCAAAGTTACATCCCGCAATGTATCCCAAAGAACCTAATAATGATCATAGGCCTGTTTATAATGATACTCAGAATCATGAGAGAGCGTGGGGTTTGCAGCATCCAACAACTGCTCGGGTTGAGGAATCAAGAGGACATGTCTCTGTATCTGGAAGAGTGAGTGATGTTCCAGTTGTAAATTTCTCTCTTGGGCATGGTAGTGTGACTGATGGACATACCCTGTCATCCAATTATCTTCATCAGCCGGTTGGACCTGAATTGGGGCCCGAACTTTTCCCTGACCAAACCATGACTGCATTACCACACGTACAAATTCCTCCTCCAGAAGAATGCAATGTGCGGTATGGAAATCCACCTTCTTCTTATGGAGTAGATGGTAATTATGCTGTGCCTGGTGGACATCCACCTGGTTTCTGGAGAAATACTCCAATGCCGGTTCATATGGGACCATCTTATGAGGCAACTACCTCACCTCCGCAGGTGAATGGTATGATAAATGCGGCATTAATCAGGGGAGAAGGCACTCCAGGGTTTTATGTTGGACCAGATAGTCAAAATCAATGGGTTGATTCCTCACAGAATTTGACAGGACATGATGGTACATCCATCCCAGAATATTCGCATGCACATGCTCTGAATTTGAATCCAACACCCCTTGGTCCAGAAAATCAGCACCCAATTACTGTAGATGCCATTCACTCTTCACAGGACATGAGTACTGGTACCTGCCCAGAACCTTTGCAGCTTCCAAAATCATCTTTTAATATCGTTCATAATCAGGAGGCTTTAAGAAATGATACCCATTTGGCAGAAGCAAATAGTTTGCTTGGAGAAGGAATAGTGGTAAAAATTGAGGACAAGGTTGAAAGCCCTGATATGCAGACTATATCTTATTCAGAGCAAAATAAAGTTGCTGAGAATGCATTTCAAGCTGCTGCTTCTGTTGATTCTAATAATTCAAAGTCAAAACCTGAAGGAGACTGCAGGCATGTTGAGAAACTGGCTGATAAGGACCATTCTGTTCCAGAAGATACTAAGCATGTAGTTAATCAATTCAGCTTCTTGCCTGAGTTGATTGCTTCCGTGAAAAAGGCTGCATTAGAAGTTGCTGAAGAGGTGAAAACTGCAGCTGATGATGACCCAGCCAATTCTCATAATCAAAAGTTAGACGCCAAAGAAAAAACAACAAATGAAGGAGAGGCAGCGAATGCTCATGGCGATTTAGAATTGGACTCTGAAAATGACCATGTAGATACTTCTAAAATTGAGCCTACGAAGGCTGAGGAAGAAGCAATTGCCAGGGGATTGCAGACTATTAAAAATGATGATTTGGAGGAGATCCGTGAGCTTGGTTCTGGAACCTATGGAGCTGTTTATCATGGGAAATGGAAAGGTTCTGACGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGGCCATCTGAAAGAGCAAGATTGATTACAGATTTCTGGAAGGAGGCATTGATGTTGAGTTCATTGCATCATCCAAATGTTGTCTCCTTTTATGGCATTGTTCGTGATGGCCCTGACAGTTCTTTAGCAACAGTCACAGAATTCATGATTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACAATTGATCGTCGTAAGAGACTCATTATAGCCATGGATGCTGCATTTGGAATGGAGTATTTGCATGGAAAAAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCTCAACGCCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTTAAACAGCACACTCTAGTGTCGGGTGGAGTGCGTGGGACTTTGCCATGGATGGCACCTGAACTTCTTAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTCTACTCATTCGGAATAGTTATGTGGGAGTTGCTCACAGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGTATTGTGAACAACAGTTTACGTCCTCAAATCCCAACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCTGAACCTGTAGAAAGACCATCATTTTCAGAAATTTCCAAGAAGCTGAGGAGTATGGCTGCTTCAATGAATGTGAAATAG 3327 0.4346 MCNKGFQCLNECESEIDHSREFFVMDSPNRSPAAGEDSRRVKFLCSFLGGIMPRPQDGKLRYVGGETRIVSVYREISYEELMGKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSSHFIDGDDSERRYVDALNSLNDVADFRRLQQGEFPMISPVEDIHVAADQFFNPMSVESGIHSHRSGELSMSPYNMHHLSIQHPQTMGPRYTEMDSPWNPAYYSPRHHGLHDSRSLVEFPSSPSSRYRMPFPELPDKCIDRGPEEYARHHVNHHPVYDNQPQYADNVLWVPTGAAHCEKAGFPGNIVHGSHVVDGNSICEQCRMGFHRGQPHLEHSNVSNGLPPVANPCGECPLPNRDAFPIVDAKLHPAMYPKEPNNDHRPVYNDTQNHERAWGLQHPTTARVEESRGHVSVSGRVSDVPVVNFSLGHGSVTDGHTLSSNYLHQPVGPELGPELFPDQTMTALPHVQIPPPEECNVRYGNPPSSYGVDGNYAVPGGHPPGFWRNTPMPVHMGPSYEATTSPPQVNGMINAALIRGEGTPGFYVGPDSQNQWVDSSQNLTGHDGTSIPEYSHAHALNLNPTPLGPENQHPITVDAIHSSQDMSTGTCPEPLQLPKSSFNIVHNQEALRNDTHLAEANSLLGEGIVVKIEDKVESPDMQTISYSEQNKVAENAFQAAASVDSNNSKSKPEGDCRHVEKLADKDHSVPEDTKHVVNQFSFLPELIASVKKAALEVAEEVKTAADDDPANSHNQKLDAKEKTTNEGEAANAHGDLELDSENDHVDTSKIEPTKAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLITDFWKEALMLSSLHHPNVVSFYGIVRDGPDSSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNSLRPQIPTWCDPEWKSLMESCWASEPVERPSFSEISKKLRSMAASMNVK* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1535 1108 Gene3D - 59 143 - -
Pvu3g1535 1108 PRINTS Tyrosine kinase catalytic domain signature 917 930 IPR001245 GO:0004672|GO:0006468
Pvu3g1535 1108 PRINTS Tyrosine kinase catalytic domain signature 954 972 IPR001245 GO:0004672|GO:0006468
Pvu3g1535 1108 PRINTS Tyrosine kinase catalytic domain signature 1025 1047 IPR001245 GO:0004672|GO:0006468
Pvu3g1535 1108 PRINTS Tyrosine kinase catalytic domain signature 1069 1091 IPR001245 GO:0004672|GO:0006468
Pvu3g1535 1108 Gene3D Transferase(Phosphotransferase) domain 1 921 1108 - -
Pvu3g1535 1108 ProSiteProfiles Protein kinase domain profile. 835 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1535 1108 PANTHER - 31 1108 - -
Pvu3g1535 1108 SUPERFAMILY Protein kinase-like (PK-like) 827 1096 IPR011009 -
Pvu3g1535 1108 Pfam PB1 domain 56 141 IPR000270 GO:0005515
Pvu3g1535 1108 MobiDBLite consensus disorder prediction 765 811 - -
Pvu3g1535 1108 SMART PB1_new 55 140 IPR000270 GO:0005515
Pvu3g1535 1108 Gene3D Phosphorylase Kinase; domain 1 821 920 - -
Pvu3g1535 1108 Pfam Protein tyrosine and serine/threonine kinase 836 1098 IPR001245 GO:0004672|GO:0006468
Pvu3g1535 1108 CDD STKc_MAP3K-like 841 1098 - -
Pvu3g1535 1108 ProSitePatterns Protein kinases ATP-binding region signature. 841 862 IPR017441 GO:0005524
Pvu3g1535 1108 CDD PB1_UP2 44 140 - -
Pvu3g1535 1108 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 31 1108 - -
Pvu3g1535 1108 SMART serkin_6 835 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1535 1108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 960 972 IPR008271 GO:0004672|GO:0006468
Pvu3g1535 1108 SUPERFAMILY CAD & PB1 domains 57 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1535 Pvu-Chr3 34795960 34802727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1535 36 1108 MAP Kinase Kinase Kinase AT5G57610 54.537 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pvu3g1535 PK_Tyr_Ser-Thr 2.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1535 - - gmx:100779077 1905.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1535 3 34795960 34802727 Pvu9g2163 9 30984629 30991137 PCT