Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu3g1524 | ATGAATTTCCATCCCAATACTTCTCTTCACCTAAGGCAACCGGATGAGATCAATCACCTCAATCTTGATCTTCTTCTTGAGCCATCTTCTTCTTCATCATCTTCTCCTTCACCTATAAGTCCCATTGAGCCGCGGATATTCTCATGCAACTATTGCCAGAGAAAGTTCTATAGCTCTCAAGCGCTAGGGGGTCACCAAAATGCTCACAAGCTTGAGAGGACACTGGCCAAGAAGAGCAGGGAAATGAGTTCAACCATGCAATCTTACGGAACACAGGAGCAAAGATCAAACTTCAGCCCTTCACACCATCTTGGTCGTGCTCTTGGGGTTAACGTTGTGGATGACCAAGGACAAAGTTATGTGAGGCTTGGCGGAAGAAAAGAATACAGTTTTGGACCCAAGGAAGGGATGGCTTCCTGGTCAAGGGGTTATACTTCTGAGCATGTTCAGGAGGATATTGGCCAACTTGACTTGTCGTTGAGGCTTTGA | 489 | 0.4601 | MNFHPNTSLHLRQPDEINHLNLDLLLEPSSSSSSSPSPISPIEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREMSSTMQSYGTQEQRSNFSPSHHLGRALGVNVVDDQGQSYVRLGGRKEYSFGPKEGMASWSRGYTSEHVQEDIGQLDLSLRL* | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu3g1524 | 162 | PANTHER | BNAC02G44440D PROTEIN | 1 | 162 | - | - | |
Pvu3g1524 | 162 | Gene3D | Classic Zinc Finger | 38 | 103 | - | - | |
Pvu3g1524 | 162 | PANTHER | ZINC FINGER PROTEIN JAGGED | 1 | 162 | IPR045320 | GO:0003700 | |
Pvu3g1524 | 162 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 47 | 74 | IPR013087 | - | |
Pvu3g1524 | 162 | SUPERFAMILY | beta-beta-alpha zinc fingers | 44 | 74 | IPR036236 | - | |
Pvu3g1524 | 162 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 49 | 69 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu3g1524 | Pvu-Chr3 | 34662288 | 34663606 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu3g1524 | 1 | 162 | C2H2 Transcription Factor Family | AT5G57520 | 47.977 | 7.21e-30 | 104 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pvu3g1524 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu3g1524 | - | - | vra:106768043 | 288.115 |