Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1523 ATGCCACCAACAACACCACCACCACCACCAACAATGGCACCTTCTCCACAAGAAATCATCTTCAGATCCCCACTTCCCGATATTCCCATTCCCACGCACCTTCCACTACACTCTTACTGCTTCCAAAATCTCTCCCAATTCCAACACCGAACATGCCTCATCGACGGCGAGACCGGCGAAACCCTCACCTACGCCGAAGTCGACCTTGCCGCCCACCGCATCGCCGCCGGCCTCCACAACATCGGCATCCGCCAGGGGGACGTCATCATGCTCGTCCTCCGCAACTGCCCCCAATTCGCCCTCGCCTTCCTCGGCGCCTCCCACCGCGGCGCCGTCATCACCACTGCCAACCCCTTCTACACGCCGCTGGAGCTTGCCAAGCAAGCAGCCGCCACCAAAACCAGGCTGGTGATAACGCAATCCGCGTACGTCGATAAAATCAAGAGCTTCGCGGACAACAATGACGTGATGGTCATGTGCATCGACTCTGAGGACGACGGCGTTTTACATTTCTCCACGCTAACGAACGCCGACGAAACGGAAGCCCCCGCCGTTAAGATTAGCCCAGACGACGTCGTGGCGCTTCCGTTTTCTTCTGGCACTTCGGGGCTCCCCAAGGGCGTTATGTTATCGCATAAAAACTTGGTCACCACCATAGCGCAGTTAGTTGACGGCGAAAACGCGCACCAGTACACTCACAGCGAGGATGTGCTCCTCTGCGTGCTTCCTATGTTTCATATCTATGCGCTCAATTCAATTTTACTCAGCGGGATTCGGTCCGGTGCGGCCGTTCTCATTGTGCAGAAGTTTGAGATGACGAGTCTGTTGGAGCTGATCCAGAAGTACAGGGTCACCGTTGCGTCCTTTGTGCCACCCATCGTTTTGGCGTTGGTTAAGAGCGGAGAGGCCCATCGATACGACCTCTCCTCTGTTCGCGCCGTCGTCACTGGCGCCGCACCCTTGGGAAGGGAACTACAAGAAGCTGTCGAATCTAGGCTACCACACGCCACTTTTGGACAGGGATATGGGATGACAGAAGCAGGACCACTTGCGATTAGCATGGCATTTGCAAAAGAACCCTCAAATATAAAACCTGGTGCATGCGGCACCGTTGTGAGAAACGCTGAGATGAAAATCGTGGACACAGAAACGGGTGTTTCCCTTCCGAAAAACGAAACCGGTGAAATTTGCATAAGAGGCACAAAGGTTATGAAAGGATATCTAAACGACCCAGAAGCTACAGAGAGAACTATAGACAAAGATGGATGGCTCCACACAGGAGATATTGGTTACATCGACGATGATGACGAACTCTTCATTGTTGATAGGTTAAAGGAACTGATCAAATACAAAGGGTTCCAAGTAGCTCCTGCTGAGCTCGAAGCATTGTTAATTGCCCATCCAAACATCTCTGAAGCTGCCGTTGTACCCATGAAAGATGAAGCTGCCGGAGAAATTCCTGTTGCATTTGTTGTAAGATCAAAAGGTTCTGAGATCACTGAAGATGAAATAAAGCAATACATTTCACAACAGGTGGTATTTTACAAGAGAATCGGTAGGGTTTTCTTCACAGACTCTATTCCTAAAGCAGCCTCAGGCAAAATTCTGAGGAAGGTACTAACTGCGAGACTTAACGAAGGTCTGGTGGTGGCCAATTAG 1659 0.5136 MPPTTPPPPPTMAPSPQEIIFRSPLPDIPIPTHLPLHSYCFQNLSQFQHRTCLIDGETGETLTYAEVDLAAHRIAAGLHNIGIRQGDVIMLVLRNCPQFALAFLGASHRGAVITTANPFYTPLELAKQAAATKTRLVITQSAYVDKIKSFADNNDVMVMCIDSEDDGVLHFSTLTNADETEAPAVKISPDDVVALPFSSGTSGLPKGVMLSHKNLVTTIAQLVDGENAHQYTHSEDVLLCVLPMFHIYALNSILLSGIRSGAAVLIVQKFEMTSLLELIQKYRVTVASFVPPIVLALVKSGEAHRYDLSSVRAVVTGAAPLGRELQEAVESRLPHATFGQGYGMTEAGPLAISMAFAKEPSNIKPGACGTVVRNAEMKIVDTETGVSLPKNETGEICIRGTKVMKGYLNDPEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPNISEAAVVPMKDEAAGEIPVAFVVRSKGSEITEDEIKQYISQQVVFYKRIGRVFFTDSIPKAASGKILRKVLTARLNEGLVVAN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1523 552 Coils Coil 550 552 - -
Pvu3g1523 552 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 15 544 - -
Pvu3g1523 552 Gene3D - 15 444 IPR042099 -
Pvu3g1523 552 SUPERFAMILY Acetyl-CoA synthetase-like 15 546 - -
Pvu3g1523 552 Gene3D - 445 548 IPR045851 -
Pvu3g1523 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 544 - -
Pvu3g1523 552 Pfam AMP-binding enzyme 43 450 IPR000873 -
Pvu3g1523 552 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Pvu3g1523 552 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Pvu3g1523 552 CDD 4CL 30 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1523 Pvu-Chr3 34642251 34646976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1523 18 512 Monolignol Biosynthesis Gene Families AT1G51680 64.752 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1523 K01904 - gmx:548034 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1523 3 34642251 34646976 Pvu3g1523 3 34642251 34646976 ECH