Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1522 ATGGAACAACAACAATCTACACAACTTCACAATGATGACTTCATTTTCCGTTCCAAACTCCCCGACATTTACATCCCCACGCACCTCCCTCTCCACACTTACATCTTCCAAAATATCTCCCAATTCAGCCACCGACCCTGCCTCATCAACGCCGCCACCGGAGACTGCTTCACCTACGCCGAGGTCCAACTCACCTCTCGCAGAGTCGCCGCCGGCCTCAACAAACTCGGCATCGAGAAGGGCGACGTCATCCTCCTTCTCCTCCAGAACTGCCCCCAGTTCGTCTTCGCATTCCTCGGCTCCTCCTTCTGTGGCGCCACTGTGACCACCGCTAACCCCTTCTACACTCCGGCGGAGGTGGCCAAGCAAGCCGCGGCGTCCAACGCCAAACTCATCATAACGCAGGCGTCCTACGTGGACAAAGTAAAGGATTACGCGAGGGAAAAGGACGTCAGAGTGATGTGCGTTGACGCGGCGCCGGAAGGTTACCTGGCCTTCTCGGATTTAACGGAGGCGAATGAGAGAGACATTCCCGGCGTTAAAATATCCCCGGACGACGTAGTTGCGCTGCCGTATTCTTCAGGAACCACAGGGCTTCCGAAGGGAGTGATGCTAACGCACAAGGGGATGGTTACGAGCGTGGCGCAACAAGTCGACGGAGAGAACCCTAATCTGTATCTACGCAGCGAGGACGTGGTGTTGTGCGTGCTTCCACTTTTCCATATTTATTCGCTCAACACTGTTTTGCTCTGTTCGCTTCGAGTTGGCGCTGCGGTTTTGGTAATGCCCAAATTTGAGATAGCTTCGTTGCTGGAATTGGTCGAGAAATACAAGGTGAGCGTGGCGCCGTTTGTGCCACCCATCATTTTGGCCATTGCAAAGACTCCAGATTTGGAGCGATACGACCTGTCCTCGATTCGAATGATTTTGTCTGGCGCCGCTCCTGTGGGAAAGGAACTTGAGGACTCTGTGAGGGCCAAACTTCCCCACGCCACACTTGGACAGGGGTATGGGATGACAGAGGCAGGGCCAGTGCTTTCAATGAGCTTAGCGTTTGCGAAGGAAGCAGTGCATGTGAAATCAGGTTCGTGCGGGACCGTAGTAAGAAACGCAGAGATGAAGATCATTGACCCTCACACTGCTGCTTCTCTCCACAGAAATCAAGCCGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGTTACCTAAATGATGAAGAGGCGACAAAAATAACTATAGACAACGATGGATGGTTGCATACGGGTGATATTGGATACATGGACGATGATGACCAGATTTTCATCGTTGATCGGTTGAAGGAGTTGATCAAATACAAAGGATTTCAAGTTGCTCCTGCTGAGCTGGAAGCCATGCTAATTGTCCACCCGAACATTTCTGAGGCTGTTGTTGTGTCCATGAAGGATGAAGTTGCAGGAGAGGTTCCAGTTGCATTTGTTGTACTGTCAAATGGTTCTAAGATCTCTGAGGAAGAAATCAAACAATACATCTCAAAGCAGGTTGTGTTTTACAAAAGAATCAGTAGGGTTTTCTTTGTGGGTTCAATTCCAAAGGCAGCCTCTGGAAAGATCTTGCGAAGAGAGCTGAGGGCAAGGCTTGCAAACGGTCTTCCTTCGTCGTGA 1644 0.5079 MEQQQSTQLHNDDFIFRSKLPDIYIPTHLPLHTYIFQNISQFSHRPCLINAATGDCFTYAEVQLTSRRVAAGLNKLGIEKGDVILLLLQNCPQFVFAFLGSSFCGATVTTANPFYTPAEVAKQAAASNAKLIITQASYVDKVKDYAREKDVRVMCVDAAPEGYLAFSDLTEANERDIPGVKISPDDVVALPYSSGTTGLPKGVMLTHKGMVTSVAQQVDGENPNLYLRSEDVVLCVLPLFHIYSLNTVLLCSLRVGAAVLVMPKFEIASLLELVEKYKVSVAPFVPPIILAIAKTPDLERYDLSSIRMILSGAAPVGKELEDSVRAKLPHATLGQGYGMTEAGPVLSMSLAFAKEAVHVKSGSCGTVVRNAEMKIIDPHTAASLHRNQAGEICIRGNQIMKGYLNDEEATKITIDNDGWLHTGDIGYMDDDDQIFIVDRLKELIKYKGFQVAPAELEAMLIVHPNISEAVVVSMKDEVAGEVPVAFVVLSNGSKISEEEIKQYISKQVVFYKRISRVFFVGSIPKAASGKILRRELRARLANGLPSS* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1522 547 Gene3D - 441 543 IPR045851 -
Pvu3g1522 547 SUPERFAMILY Acetyl-CoA synthetase-like 13 543 - -
Pvu3g1522 547 Pfam AMP-binding enzyme 38 446 IPR000873 -
Pvu3g1522 547 Gene3D - 6 440 IPR042099 -
Pvu3g1522 547 CDD 4CL 25 536 - -
Pvu3g1522 547 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Pvu3g1522 547 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 11 540 - -
Pvu3g1522 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 540 - -
Pvu3g1522 547 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1522 Pvu-Chr3 34628465 34633500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1522 1 508 Monolignol Biosynthesis Gene Families AT1G51680 67.829 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1522 K01904 - gmx:100779668 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1522 3 34628465 34633500 Pvu3g1522 3 34628465 34633500 ECH