Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1516 ATGGAAACTGATGAGGAGTGCTCAATTGTTCTTGAATTACCTGAAACGGATCCTTTCTATGACAAAAAGAAGAAATTACTACAAAGTAAGGGTTTTAGTCCCAAAGAACGGATATACTTCAGGAGCTCTTCAAAACCTGGCTGGATGAGTGCTACTGTGGAGGTGTTACTTCAGATTGCACGGATCATACAATTAAATGAGGTGGAACTTTATTTTGCTGAAGATGATATGGAATTTTACAGTCCCAGGAATGAGCTGGAGGCTCTCAATTCAATTGTTTTGCTCATTGACATATCACTTTCTAGTTGTTCAGATCTCCATACAAATATCCTGCAAGGGTTACGCCAAACTATTCTTGATTTAATTTCTGATTCGGGGGACAAAAACAGTGTGAAGGGAGTAGTTGAAAAAGACCACAGTTGTAACCAAGAAGAATGCCTGATAGAATGGGGTGAAAGCAACGGTGTAAAGACACAGTTAAAAATAGCTTATATTGAAGGAGCTGGTCGAGGTGCAATAGCAAGGAAAGATCTAAAAGTTGGAGACATTGCTTTGGAAATTCCTGTGTCCATTATCATTTCTGAGGAGGTTATACAGGAAACTGAAATGTATGGTGTCTTAAAAGAAATTGACGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAAAAGTACAACAGTGATTCAAAATTCAAAATTTATTTTGACACACTCCCAGAAAAATTTAATACAGGTTTGAGTTTCAGCATTCAAGCAATTACAGTGTTAGATGGAACGTTGCTGTTGGAAGAGATAATGCAAGCACGGCAGCACCTGCATGCTCAATATGATGAGTTGTTCCCTGCTCTATGCAATACTTTTCCTGATATATTTCCACCAGAGCTGTACACATGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCCAATAGCATGAAGATAAAGTATTCCGATGGAAAGCTAAAAACATGCTTGATCCCTATTGCTGGCTTTCTTAATCATTCACTGTGCCCACATGTTATGCACTATGGCCAAGTGGATCCTGCAAAAAATTCACTGAAATTTTGTCTGTCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGCTACGGCAACTTCTCCAGCTCTCATCTAATTACCTTTTATGGTTTTTTACCACAAGGAGACAACCCGTATGATGTTATTCCGTTAGACATTGACGGCACCGACGTTGATTCTAATGAGGATATACCCAGGTCCAACTGGACGAGTCACATGGTGCGTGGTACCTGGCTCTCCAGGGATCACAAGATATTCAATTATGGTCTTCCCTCTCCATTATTGGACCATCTTCGGAGATGTCGAAGTCCCATGCTGCGAACAAAGACCTTTTTGCAAGAAAGCTTGGAAAATGAGCTCGAAGTTCTTGAAAATCTGAAAGATATCTTCGATGACATGATGGGAAATATGGGCGAGATCGATCTTGATGACAGAGAAAACTGCAATTGGGATGAAAAATTGGCTATGGATTTTAAAAATACACAAAGGCGAATTGCGCATTCTGTTTCAACCTCGTGCCTCGCTGGTATGGATATGTTAAAGAACGAACTATGCAAGTGCATGGCTGAGGACATCCTAGGCTAG 1638 0.4005 METDEECSIVLELPETDPFYDKKKKLLQSKGFSPKERIYFRSSSKPGWMSATVEVLLQIARIIQLNEVELYFAEDDMEFYSPRNELEALNSIVLLIDISLSSCSDLHTNILQGLRQTILDLISDSGDKNSVKGVVEKDHSCNQEECLIEWGESNGVKTQLKIAYIEGAGRGAIARKDLKVGDIALEIPVSIIISEEVIQETEMYGVLKEIDGISSETILLLWSMKEKYNSDSKFKIYFDTLPEKFNTGLSFSIQAITVLDGTLLLEEIMQARQHLHAQYDELFPALCNTFPDIFPPELYTWEKFLWACELWYSNSMKIKYSDGKLKTCLIPIAGFLNHSLCPHVMHYGQVDPAKNSLKFCLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNPYDVIPLDIDGTDVDSNEDIPRSNWTSHMVRGTWLSRDHKIFNYGLPSPLLDHLRRCRSPMLRTKTFLQESLENELEVLENLKDIFDDMMGNMGEIDLDDRENCNWDEKLAMDFKNTQRRIAHSVSTSCLAGMDMLKNELCKCMAEDILG* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1516 545 CDD SET_LSMT 160 390 - -
Pvu3g1516 545 Gene3D - 2 106 IPR036464 -
Pvu3g1516 545 SUPERFAMILY SET domain 145 397 IPR046341 -
Pvu3g1516 545 PANTHER BNAA07G01600D PROTEIN 3 541 - -
Pvu3g1516 545 Coils Coil 464 484 - -
Pvu3g1516 545 Pfam SET domain 169 376 IPR001214 GO:0005515
Pvu3g1516 545 ProSiteProfiles SET domain profile. 158 376 IPR001214 GO:0005515
Pvu3g1516 545 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 541 - -
Pvu3g1516 545 Gene3D set domain protein methyltransferase, domain 1 107 389 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu3g1516 SET 3.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1516 K19199 - gmx:100778605 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1516 3 34503425 34511401 Pvu3g1516 3 34503425 34511401 ECH