Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1497 ATGGCTACAGATTCGTCTTTTGAGGGTCTTGCTCTTGATCCTTCCAAGTGCAGTAAATTGAGTATGGAGGAAAAAAGAGAACTTGTATATGAAGTATCTAAGTGGTCTCATGGTGCATCTGAGATGCTGCAGTCATGGAGCCGTCAAGAGATTTTGCAAATATTGTGTGCAGAAATGGGAAAAGAGAGAAAGTATACTGGGCTGACAAAGTTGAAAATTATAGAAAATCTTCTAAAAATTGTTTCTGAAAAGAAATCAGGGGGGCATGAAACTGCGACAGACCCTGAACCACATTCCTCTCCTGCATCTGGTCAGAAACCTGCTAAAAGGCAGAGAAAATCTGAGAATCCTTCTCAGTTACCTGTTCCTGTGACCAGCATTTCAGTCAATAATAGTAGTGATTCTGTTAATACTACATACTGCAAAAACTCAGCCTGCAAAGCTACCCTGAATCAAGCAGATGCATTTTGTAAAAGATGTTCATGCTGCATTTGTCATCAATATGATGACAACAAAGACCCTAGCCTGTGGTTAATATGTAGTTCTGAGAATCCATTTCCCGGTGTTTCTTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATAATGGTTCTGGAATTGGCAAAGATGGGGAGCGTCCCAAGCTTGATGGAGGCTTCTACTGTGTTGCTTGTGGGAAAGTAAATGATTTACTCGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATACTAGACGTGTAGATATACTCTGTTATCGTGTCTCGTTAAGCCAGAGACTTTTACAAGGAACTGAAAAGTATGACGAACTTTATAAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGCCCACTCACTGGCTCACCGGTGAAGATTGGTAGGGGAATTGTGAACAGGCTTTCTTCAGGGCCTGAGGTTCAGAAACAATGTGGTTTTGCTCTTGAATCGCTTGATTCACTGCTTTCGAAATGGATCTTGCCATCATCACCCAATCCAACAACTCAAGATGCACATTTTCTGGCTCCAAATATGGTGAGGTTTGAAGATGTCACTGCCACATCCCTCACTATTATTTTGGGTACCAAAGAACCCTCTGGTGAAAATATCGCGGCTTATACCATGTGGTATCGCAAAGCTGATGAAGTAGACTATCCCATGGACCCGACATGCACATCGTTGGTACCAAGTAGAAGGTTCAGTGTCAGGGGTCTACTTCCAGGTACAGAATACAGTTTCAAAGTTGTTTCAAATGATTCGAGGGAGTCAGGTGTGTGTGAAGTTCAAATCACAACAGAGCTTGGCGAGGATGAAGTCCCTAATTGCTCAGCAACAGAGAGAAGTCAAAGCCCAGTAACCAACTGTAGCAGCCTTTCCAATCCGTCATCAGTGGAAGATGAAACTAATAACTGCAATCCATATAGTGACCTGACTGATAACCGAGGAGGTCATTATCCTCCTTATCACAAGGAAAGCGACCAGCTTGCTTCTGGAAATTTATCTAATGATGCTGTTAACTGTTCCAATATAGATGTTGTGGGTCTTCCTCCTGATGCAGATTCTTTGTCAGACAAGCAGCATGCTGTAGGAATGACTGCCTCCATACCTAGTTCTGACGTGCTAAAGCTGGAAGACAAGCACTCGCCTGAGGAACAAGTGACTGAGGACATGAGCATTGACGATGGGTTGAATTCTCCAGTTCTAACGGGTAGGGAATGTGTGCCGTTGGTAGGTAGCTCGGAAGGAGGCTTGCCTAATACTCCCTGCAAGTTGGAAACACTTAAGGATGGAGCAGGAAGGATTGGAAGATCCAAGTCCAGTGCCAAAGATCAAGAAAATGGATCCGGGAAAAGGGAGGGCCCCCAGGATGGAAGCACATCCAAGAAGAGAAGCGGAGAAAGGCAAGATGAGGGCCGTGTCGCTAATGGCTTTTCGGAGCGTGATTTTGAGTATTATGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGGCACATAGAGAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCCACCCCTCAAGAAGTAAGGATTGTGAAAATATACATTGATACATTTCTCGAAGATCCAGCATCTCTTGCAGAGCAACTTGTGGACACCTTCTCAGAATGTATATCCAGCAAGAGAATATCAGTGGTGCCAGCGGGGTTCTGCATGAAGCTTTGGCATTGA 2214 0.4386 MATDSSFEGLALDPSKCSKLSMEEKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGHETATDPEPHSSPASGQKPAKRQRKSENPSQLPVPVTSISVNNSSDSVNTTYCKNSACKATLNQADAFCKRCSCCICHQYDDNKDPSLWLICSSENPFPGVSCGLSCHLECALKHNGSGIGKDGERPKLDGGFYCVACGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRLLQGTEKYDELYKIVDEAVKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKQCGFALESLDSLLSKWILPSSPNPTTQDAHFLAPNMVRFEDVTATSLTIILGTKEPSGENIAAYTMWYRKADEVDYPMDPTCTSLVPSRRFSVRGLLPGTEYSFKVVSNDSRESGVCEVQITTELGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLTDNRGGHYPPYHKESDQLASGNLSNDAVNCSNIDVVGLPPDADSLSDKQHAVGMTASIPSSDVLKLEDKHSPEEQVTEDMSIDDGLNSPVLTGRECVPLVGSSEGGLPNTPCKLETLKDGAGRIGRSKSSAKDQENGSGKREGPQDGSTSKKRSGERQDEGRVANGFSERDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSKRISVVPAGFCMKLWH* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1497 737 MobiDBLite consensus disorder prediction 441 481 - -
Pvu3g1497 737 Pfam Fibronectin type III domain 346 421 IPR003961 GO:0005515
Pvu3g1497 737 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 737 - -
Pvu3g1497 737 MobiDBLite consensus disorder prediction 582 644 - -
Pvu3g1497 737 MobiDBLite consensus disorder prediction 114 129 - -
Pvu3g1497 737 ProSiteProfiles Fibronectin type-III domain profile. 346 441 IPR003961 GO:0005515
Pvu3g1497 737 MobiDBLite consensus disorder prediction 546 570 - -
Pvu3g1497 737 MobiDBLite consensus disorder prediction 85 129 - -
Pvu3g1497 737 CDD FN3 346 436 IPR003961 GO:0005515
Pvu3g1497 737 Gene3D Immunoglobulins 344 442 IPR013783 -
Pvu3g1497 737 CDD PHD_VIN3_plant 161 226 - -
Pvu3g1497 737 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 737 IPR044514 GO:0010048|GO:0040029
Pvu3g1497 737 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
Pvu3g1497 737 MobiDBLite consensus disorder prediction 600 644 - -
Pvu3g1497 737 MobiDBLite consensus disorder prediction 441 500 - -
Pvu3g1497 737 SUPERFAMILY Fibronectin type III 346 425 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1497 Pvu-Chr3 34117567 34122737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1497 4 474 PHD Gene Family AT4G30200 55.754 1.05e-166 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1497 - - gmx:100794721 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1497 3 34117567 34122737 Pvu3g1497 3 34117567 34122737 ECH