Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1495 ATGAGGTATATTCGGAGCAACAGCTTCAAGAGGCTCTTCTCCTTTGGAAGACGAGGTTCAAGGGAACAAGTTCTGAGTCCTAAAGGTGGAGAAAGTCATGAGACTCTTCCGTATAAAGAAGAACCTTATGGAAGACCCTCTTGGAAGTGCTTCTCTTATGAAGACTTGTTTGTTGCCACAAATGGCTTCAGCTCAGAAAATTTGGTTGGAAAAGGAGGGTATGCGGAGGTTTACAAGGGAACAGTGAATGGGGGTGAGGAAATTGCTGTGAAGAGACTCACAAGAACTTCGAGGGATGAGAGAAAGGAGAAAGAGTTTTTGACAGAGATTGGTACAATTGGTCATGTGAACCATTCCAATGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGCCTTTACCTTGTTTTTGAGCTATCTTCTAGAGGTTCTGTTGCATCACTTCTTCATGATGAAAAGTTGCCCCCTTTAGATTGGAAAACGAGGCACAAGATAGCTATTGGAACTGCACGCGGCCTCCACTACTTGCATAAGGGCTGCAAGAGGAGGATAATCCACCGGGACATTAAGGCGTCAAACATTTTGTTAACGAAGGATTTTGAGCCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCTCAATGGACTCATCACTCCATTGCCCCAATAGAAGGGACATTTGGACATTTGGCCCCAGAGTACTACTTGCATGGAGTTGTGGATGAGAAGACAGATGTGTTTGCCTTTGGTGTGTTCTTGCTAGAAGTAATCTCAGGCAGAAAACCAGTAGATGGGTCACACCAAAGCTTACACAGCTGGGCAAAACCAATTTTGAACAAGGGTGGGATTGAAGAGTTGGTAGATCCAAGGCTTGAAGGGGCTTATGATGTGACAGAGTTAAAAAGATTTGCCTTTGCTGCATCTCTTTGCATTCGGGCTTCTTCAACTTGGCGACCTACCATGACTGAGGTACTGGAGGTAATGGAAAAGGGAGAAAAAGATACAGAAAAGTGGAAAATGCCAGAGGAAGAAGAAGAAGAGGAGGAGGAGTTCTGGGGTTTTGAGGATCTTGAGTATGAATATGATAGCTCCTTTTCAATGTCATTACTTGATTCCATTGGAAGCACTACTTAG 1140 0.4386 MRYIRSNSFKRLFSFGRRGSREQVLSPKGGESHETLPYKEEPYGRPSWKCFSYEDLFVATNGFSSENLVGKGGYAEVYKGTVNGGEEIAVKRLTRTSRDERKEKEFLTEIGTIGHVNHSNVLPLLGCCIDNGLYLVFELSSRGSVASLLHDEKLPPLDWKTRHKIAIGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWAKPILNKGGIEELVDPRLEGAYDVTELKRFAFAASLCIRASSTWRPTMTEVLEVMEKGEKDTEKWKMPEEEEEEEEEFWGFEDLEYEYDSSFSMSLLDSIGSTT* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1495 379 PANTHER OS08G0249100 PROTEIN 33 360 - -
Pvu3g1495 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Pvu3g1495 379 ProSiteProfiles Protein kinase domain profile. 63 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1495 379 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Pvu3g1495 379 CDD STKc_IRAK 69 332 - -
Pvu3g1495 379 SUPERFAMILY Protein kinase-like (PK-like) 39 330 IPR011009 -
Pvu3g1495 379 Gene3D Transferase(Phosphotransferase) domain 1 141 356 - -
Pvu3g1495 379 Pfam Protein tyrosine and serine/threonine kinase 66 270 IPR001245 GO:0004672|GO:0006468
Pvu3g1495 379 PANTHER OS04G0654600 PROTEIN 33 360 - -
Pvu3g1495 379 Gene3D Phosphorylase Kinase; domain 1 37 139 - -
Pvu3g1495 379 SMART serkin_6 63 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1495 Pvu-Chr3 34085913 34089954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1495 49 351 Receptor kinase-like Gene Family AT1G60800 43.087 3.63e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu3g1495 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1495 - - gmx:100305398 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1495 3 34085913 34089954 Pvu9g2483 9 35303745 35307164 PCT