Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1490 ATGGAAGGGCAAGTAGCTAAACGCAGACGTGTATACTCTGTGGAACCAAACCAAATAGTGAGATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCAGCGTTGGTGAAGATAAAGGAAAAGAGCTCTATAGAAGATAACAGCCATTGTGATATTAACAATGCTGTCAAGTATGAGGTGGACATGGCAATGGTGTTGTCAGCACAAGGTTTTGCATGGAGTAACGGCCTTAAAGTCAAGCTTCAAAACGATCATTTTCGTGTCAATGCAGCTAAAAGCAGTACGTTTCTTGAAAATGAGGATGGTGAAGGTTCACCAAAGGCTTGTGACAAAAATGAGGTTGTCCCAATGGAATTCTCTTCAAACCCTAGCTCGAAGTCTAAGGTAGAGGCTCTAGGGAGCAAGTCCAAGTGCAAGGAATTGTCAGAAATGGAACGGGATTTGGCCAGAGAAGATGATAATGAAGATGAGGACATCAACAAGCAGTTGAAGAGGCTGAGAAGGTTAATACCTGGAGGAGAAGAGATGTGTGATGAACAAATGGGTAAAGAGCTTGAGAGTTACATAAGCTGTTTGCAAATGCAGGTGAACGCTCTTCAGTTACTGCTGCCACAGACGCGTTAA 627 0.4211 MEGQVAKRRRVYSVEPNQIVRSIFTRNYLNHLVPALVKIKEKSSIEDNSHCDINNAVKYEVDMAMVLSAQGFAWSNGLKVKLQNDHFRVNAAKSSTFLENEDGEGSPKACDKNEVVPMEFSSNPSSKSKVEALGSKSKCKELSEMERDLAREDDNEDEDINKQLKRLRRLIPGGEEMCDEQMGKELESYISCLQMQVNALQLLLPQTR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1490 208 CDD bHLH_AtIBH1_like 151 204 IPR044549 GO:0006355
Pvu3g1490 208 PANTHER TRANSCRIPTION FACTOR BHLH146 2 206 - -
Pvu3g1490 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 206 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1490 Pvu-Chr3 33991043 33991669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1490 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 49.398 2.82e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1490 - - gmx:100775329 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1490 3 33991043 33991669 Pvu9g2468 9 35158234 35159346 PCT