Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1484 ATGACAGTAACCTACGAAGCCTGTTACACCGTGAAGCCTATGGAGCCAACAAAGTGTGGACGTGTACCCTTATCTGAATGGGATCAAATAGGTACCATAACTCACGTTCCCACAATCTACTTCTATCGTCTCTCACAAAACTTCCATCTCTTCCCAAACAACACCATTGCTTCCAACTTGAAGGACTCATTAAGCCGAGTCCTTGTGCCGTTTTATCCTCTAGCTGGTCGTTTACGCTGGATAAGCAATGGTCGTTTAGAGCTTGATTGCAATGCCATGGGGGTTCAGTTCGTTGAAGCTCAGTCCTCATCAAGTTTAGAAGATCTGGGTGACTTTTCACCCTCTTCAGAACACCACTATCTTTTTCCCAAAGTAGACTACACTCTCCCAATTCACGAGTTGCCCTTGGTTCTGGCTCAGTTAACCAAGTTCAAGTGTGGTGGCATCAGCATCAGCATGACAATTTCTCATGCCGTTGCTGATGGACCAAGTGCCCTGCACTTCACTCGCGAGTGGGCGAGGCTTGCACGCGGCGAAACTCTGGAAAAGGTGCCGTTTCTTGACTGGAAAGTGTTTCGTGCTGGGGAGCCTCCTTCGGTGCCGCTAACAAAGTGTCACGTTCACACGGAGTTCGATCACCCTCCGTTGTTGCTGGGGCAAACGAATAACTCAGAGGAAAGGAAGAAGAAAACCACAGTGGCTAATCTGAAACTGAGCAAATTCCAAGTTGAGACTCTGAGAAAGACAGCGAATGAGAGTTGGAATAGACCCAGGAACGGTCGTGCTTACAGTCGTTACGAGAGTGTAACTGGTCACGTGTGGAGAAGTGTATGCAAGGCAAGAGGGCACAGAGAGGAGCAACCAACCGGGGTTGGTATTTGCGTTGACTCGAGGAGTCGCATGGAACCTCCTTTGCCAAAAGAGTATTTTGGAAATGCCACTTTGTATGTGGTTGCTTCTAGCCTGGCGGGTGATTTGATGTCAAAGCCTTTGGGGTATGCGTCGAGTAGAATAAGAGAGGCCATTGAGAGGGTGAATGATGAGTACGTGAGGTCGGCGGTTGAGTTCTTGAAGAATCAGGAAGACTTGAGTAGGTTTCAGGATCTTCATGCAGTAGAAAGTGAGAAAGGGCTTTTCTATGGGAACCCTAATCTTGGTGTGGTTAGTTGGTTGACTTTGCCCTTCTATGGGCTTGATTTTGGGTGGGGGAAGGAGGTTTATATGGGTCCAGGCACGCATGTACATGACTTTGATGGAGATTCTTTGCTTCTTCCTGGTCCTGATGAGGATGATGGATCTTTGTTGCTTCATTTATGTTTGCAAGTGGTGCATATGGATGCGTTTAAGAAGCATTTTTACGAGGACATTGAGTTTTTTTTTTATCAGCAAAGAATAAATAAAATAAAATGA 1410 0.4652 MTVTYEACYTVKPMEPTKCGRVPLSEWDQIGTITHVPTIYFYRLSQNFHLFPNNTIASNLKDSLSRVLVPFYPLAGRLRWISNGRLELDCNAMGVQFVEAQSSSSLEDLGDFSPSSEHHYLFPKVDYTLPIHELPLVLAQLTKFKCGGISISMTISHAVADGPSALHFTREWARLARGETLEKVPFLDWKVFRAGEPPSVPLTKCHVHTEFDHPPLLLGQTNNSEERKKKTTVANLKLSKFQVETLRKTANESWNRPRNGRAYSRYESVTGHVWRSVCKARGHREEQPTGVGICVDSRSRMEPPLPKEYFGNATLYVVASSLAGDLMSKPLGYASSRIREAIERVNDEYVRSAVEFLKNQEDLSRFQDLHAVESEKGLFYGNPNLGVVSWLTLPFYGLDFGWGKEVYMGPGTHVHDFDGDSLLLPGPDEDDGSLLLHLCLQVVHMDAFKKHFYEDIEFFFYQQRINKIK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1484 469 Pfam Transferase family 1 454 - -
Pvu3g1484 469 SUPERFAMILY CoA-dependent acyltransferases 59 187 - -
Pvu3g1484 469 Gene3D - 1 212 IPR023213 -
Pvu3g1484 469 Gene3D - 219 455 IPR023213 -
Pvu3g1484 469 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 456 - -
Pvu3g1484 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1484 Pvu-Chr3 33864481 33865890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1484 1 454 Monolignol Biosynthesis Gene Families AT5G48930 39.121 6.84e-107 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1484 K13065 - gmx:100777007 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1484 3 33864481 33865890 Pvu3g1484 3 33864481 33865890 ECH