Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1480 ATGGAGAAGAGTAAAAAATTGCAGAAAAGCTACTTTGATGTGCTGGGTCTCTGCTGCTCCTCTGAAGTGCCACTCATTGAAAACATCTTAAAGCCTCTTGAAGGAATCAAAGAGGTTTCTGTGATAGTTCCTTCACGAACTGTCATTGTTCTCCATGACACTCTTGCCATTTCGCAACTTCAAATCGTTAAGGCATTGAATCAAGCAAGATTAGAAGCGAATATCAGAGTACATGGAGATGAAAAGCACAAGAAAAGATGGCCAAACCCATACTCAATTGCATCTGGTGTTCTACTTTTGGTTTCCCTTCTGAAATTTGTTTACCATCCCATGAAGTATGTAGCACTTGGTGCAGTTGCTGCTGGTGTTTACCCTATCATCCTAAAGGCCATTGCCTCCATTCGAAATCGTAGAATTGACATTAGCATTCTCATGATCATAGCAGTTATTGGGACAATTGCAATGGATGATTATTTGGAAGCCGGCACCATCGTTTTCCTCTTCTCAATTGCAGAATGGCTAGAATCAAGGGCAAGTTACAAGGCAAATGCAGCTATGTCGTCTTTGATGAACATTACCCCTCAAAAAGCAGTTATAGCTGAAACAGGAGAGGTTGTGGATGCTGATGAGGTGAAAGTAAACACCATTTTAGCTGTTAAAGCAGGCGAGGTGATACCCATTGATGGAGTTGTTCTAGATGGAACCTGTGAAGTTGACGAGAAAACTTTGACTGGGGAATCATTCCCTGTGGCAAAACAAAAGGATTCTACTGTGTGGGCTGGCACCATCAATTTGAATGGTTATATCAGTGTGAAAACTACTGCACTGGCTGAAGACTGTGTGGTGGCTAAAATGACAAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACCACCGTTCAGAGATTGATTGACAAGTTTGTCAAGTTTTATACCCCTGCCGTTGTAATCATAGCAATCCTTGTAGCAGTGATTCCAGTTGCGGTAAAATCACGTAAAGAGAAATACTGGCTTCACACAGCGTTGGTTGTTTTAGTAAGTGGATGTCCATGTGCACTCATCCTTTCAACGCCAGTTGCAACCTTTTGTGCTTACACCAGAGCAGCCACATCAGGTCTTCTCATCAAAGGGGGTCATCATCTTGAAACACTTGCAAAAATCAAGGTTATGGCCTTTGACAAAACGGGTACCATAACGAAGGGTGATTTTGTGGTCACACAGTTTCAATCTCTTTCAGCAGACATAGATTTGAACACATTGCTTTACTGGGTGTCAAGTGTAGAGAGCAAGTCAAGCCATCCACTGGCATCTGCGATTGTTGATTATGGAAGGTCTCTCTCCATTGAACCAGAGCCAGAAAAGGTGACAGAATTTGAAAACTTTCCTGGGGAAGGAATTAGTGGGAAAATGGAAGACAGAGTTATTTACATCGGAAATAAAAAAATTGCTGCAAGGGCCGGGTCTGAAACAGTTCCTATATTACAAGGAGAGATTGCAAGAGGAAAGACCACTGGATACATATACCTAGGAGCAACCCAAGTTGGACTTTTCTCTCTTTCAGATGTTTGCAGGTTAGGGGTTCAGGAAGCAATTGAGCGGTTGAAGTTATTGGGAATCAAAACAGCCATGCTCACTGGAGATAGTGAATCTGCTGCAATGCAAGCACAGGAGCAGTTGGGGCATTCTCTGGAGTTAGTCCATGCAGAACTTTTGCCAGAGGACAAGGTCAAAATCATCTCAGAATTTAAGAAGGAAGGTCCAACTGCCATGATTGGAGATGGTATAAACGATGCGCCGGCATTAGCTTCAGCTGATATTGGAATCTCAATGGGCATTTCAGGTTCTGCACTGGCAAGTGAGACGGGCAATATAATTCTTATGTCAAATGACATTAGGAAGATACCAGAAGCCATTAAGCTTGCAAGAAGAACACGTTGGAAAGTGCTAGAAAACATTATTTTGTCAATCACTACTAAGGCTGCGATTATTGGTTTGGCCCTTGGTGGTTATCCATTTGTTTGGGCAGCAGTTGTTGCTGATGTTGGAACGTGTCTATTGGTCATCTTGAACAGCATGTTACTTCTTCGAAGAGGACACAAGCATGGAGGAAATTTATGTAGATCTTCCACTAAATCACATAACCACAAAAGTGGATGTGGTGGTACTCATGACCATGATCATGCTCACCATCAACATCAACATTGTCATGATCATGAACATGAGCACGATCACCATCACCATCACCATCAACATGAGCATGAGCATGATCACCATCACCATCGCCACCATCAACATGAGCATGATCACGAGCATGATCACCATCACCATCATAGCCATGAGACAGAAAACATGTCTCAACCTCAGAAATGTGGTGGCAGTCATGTTAGTTCCTCTCACCATCATCATCATCATCTACAACATCAACATGAGCATGATCATGAGCATGAGCATGATCACCATCACCATCATAGCCATGAGACAGAAAACATACCTCAACCTCAGAAATGTGGTGGCAGTCATGTTAGTTCCTCTCACCATCATCATCATCATCTACAACATCAACATGAGCATGAGCATTATGAACATCATCACCATAATCAACATGAACATCATAGCTGTAATCAACATGATCATCAAAATCATAGCCATAATCAACTTGATCAACATCAACATCCTCAGCAGTGTGTCTCCTCCCAGACAAGTTCCTCAACATCTCCACCCTGCTCTTCAGATTCAAGTTTACGTGGAATTGTTAATCATTCTAACACCATGAAGGGTCATGATCTATTTAAAAGAAGCGATGAACTCCATGAACACGATCACTGTCATCGTGGAAGATGTGACAAGAATGAGGATGGAGTCCAGAAGCTCGAAACGGAAAACCATGGTGGTTCGAATTCAAGCAGTTTGATTCTAAATGCAGAAGATAATCATGCAGTTGGTAATTGTTTGGGGCATAAGGCTCATGGAACAAAACACTACCACAACCAACATGTTGATAGGGTTGCTCATGATGGAGTTTCACATAGTTCCCCTTACCATCCCCATCTTTCTTGTCAAAAGGAGAGCCAACAACTCACCAATGACCATTGCCACCCCATCCTTGGTTGTGAAAACCTGAAAGACCATAAATGCAGCAGTGTTTTACATTCCAACCAAGACATGCATCATAAAAAGTCAGGTTGTAGTCCAGACTTTGAGAAGAATGGGACAGGTGAAATATCCGTTGACATCATCGTTGAACAAGAATTATCACCAATGCATGGTTGTTCAAGTTTGGCAGAGAAAGAGAAAGGTTCCTGCTGTGAAGGCTGCTCAGACACATGCGAGAATTTGCCTGCTGTGTGTTGTTGTGAGGGTTCAAAGGAGGGAGAAGACAGTGCATGTTGCAGAGATGAATGCTCTTCAAAAGAATGCAAGGAATCTCCAGTTGTTCATGTTTGTCTTGGTTGGGATAAGAGAGAATTGGGTGGATGTTGCAAGAGCTACATGAAGGAATGCTGTGGCAAACTTGGAGACTCAAGAGCTGGTTTTGTAGGAGGTTTGTCGGAAATTATGACAGAATAG 3564 0.4248 MEKSKKLQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVLHDTLAISQLQIVKALNQARLEANIRVHGDEKHKKRWPNPYSIASGVLLLVSLLKFVYHPMKYVALGAVAAGVYPIILKAIASIRNRRIDISILMIIAVIGTIAMDDYLEAGTIVFLFSIAEWLESRASYKANAAMSSLMNITPQKAVIAETGEVVDADEVKVNTILAVKAGEVIPIDGVVLDGTCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMTKLVEEAQNSKTTVQRLIDKFVKFYTPAVVIIAILVAVIPVAVKSRKEKYWLHTALVVLVSGCPCALILSTPVATFCAYTRAATSGLLIKGGHHLETLAKIKVMAFDKTGTITKGDFVVTQFQSLSADIDLNTLLYWVSSVESKSSHPLASAIVDYGRSLSIEPEPEKVTEFENFPGEGISGKMEDRVIYIGNKKIAARAGSETVPILQGEIARGKTTGYIYLGATQVGLFSLSDVCRLGVQEAIERLKLLGIKTAMLTGDSESAAMQAQEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIGDGINDAPALASADIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARRTRWKVLENIILSITTKAAIIGLALGGYPFVWAAVVADVGTCLLVILNSMLLLRRGHKHGGNLCRSSTKSHNHKSGCGGTHDHDHAHHQHQHCHDHEHEHDHHHHHHQHEHEHDHHHHRHHQHEHDHEHDHHHHHSHETENMSQPQKCGGSHVSSSHHHHHHLQHQHEHDHEHEHDHHHHHSHETENIPQPQKCGGSHVSSSHHHHHHLQHQHEHEHYEHHHHNQHEHHSCNQHDHQNHSHNQLDQHQHPQQCVSSQTSSSTSPPCSSDSSLRGIVNHSNTMKGHDLFKRSDELHEHDHCHRGRCDKNEDGVQKLETENHGGSNSSSLILNAEDNHAVGNCLGHKAHGTKHYHNQHVDRVAHDGVSHSSPYHPHLSCQKESQQLTNDHCHPILGCENLKDHKCSSVLHSNQDMHHKKSGCSPDFEKNGTGEISVDIIVEQELSPMHGCSSLAEKEKGSCCEGCSDTCENLPAVCCCEGSKEGEDSACCRDECSSKECKESPVVHVCLGWDKRELGGCCKSYMKECCGKLGDSRAGFVGGLSEIMTE* 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1480 1187 MobiDBLite consensus disorder prediction 702 919 - -
Pvu3g1480 1187 PRINTS P-type cation-transporting ATPase superfamily signature 239 253 - -
Pvu3g1480 1187 PRINTS P-type cation-transporting ATPase superfamily signature 390 404 - -
Pvu3g1480 1187 PRINTS P-type cation-transporting ATPase superfamily signature 536 546 - -
Pvu3g1480 1187 PRINTS P-type cation-transporting ATPase superfamily signature 590 609 - -
Pvu3g1480 1187 PRINTS P-type cation-transporting ATPase superfamily signature 614 626 - -
Pvu3g1480 1187 Pfam E1-E2 ATPase 200 368 - -
Pvu3g1480 1187 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 719 - -
Pvu3g1480 1187 SUPERFAMILY Calcium ATPase, transduction domain A 204 289 IPR008250 -
Pvu3g1480 1187 MobiDBLite consensus disorder prediction 740 769 - -
Pvu3g1480 1187 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 3 719 - -
Pvu3g1480 1187 Gene3D - 401 522 IPR023299 GO:0000166
Pvu3g1480 1187 MobiDBLite consensus disorder prediction 716 739 - -
Pvu3g1480 1187 SUPERFAMILY HMA, heavy metal-associated domain 6 74 IPR036163 GO:0046872
Pvu3g1480 1187 MobiDBLite consensus disorder prediction 808 828 - -
Pvu3g1480 1187 PRINTS Copper-transporting ATPase signature 181 199 - -
Pvu3g1480 1187 PRINTS Copper-transporting ATPase signature 312 326 - -
Pvu3g1480 1187 PRINTS Copper-transporting ATPase signature 568 585 - -
Pvu3g1480 1187 PRINTS Copper-transporting ATPase signature 625 639 - -
Pvu3g1480 1187 MobiDBLite consensus disorder prediction 853 884 - -
Pvu3g1480 1187 Gene3D - 3 77 - -
Pvu3g1480 1187 SUPERFAMILY HAD-like 389 691 IPR036412 -
Pvu3g1480 1187 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 666 IPR023298 -
Pvu3g1480 1187 ProSitePatterns Hypothetical cof family signature 2. 590 612 - -
Pvu3g1480 1187 MobiDBLite consensus disorder prediction 885 919 - -
Pvu3g1480 1187 CDD P-type_ATPase_HM 114 692 - -
Pvu3g1480 1187 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 141 482 - -
Pvu3g1480 1187 Pfam haloacid dehalogenase-like hydrolase 386 604 - -
Pvu3g1480 1187 SFLD Haloacid Dehalogenase 373 643 - -
Pvu3g1480 1187 ProSitePatterns E1-E2 ATPases phosphorylation site. 392 398 IPR018303 -
Pvu3g1480 1187 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 142 693 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu3g1480 1187 SFLD p-type atpase 373 643 IPR044492 -
Pvu3g1480 1187 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 164 671 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu3g1480 1187 ProSiteProfiles Heavy-metal-associated domain profile. 9 75 IPR006121 GO:0046872
Pvu3g1480 1187 Gene3D - 178 293 - -
Pvu3g1480 1187 Gene3D - 381 641 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1480 Pvu-Chr3 33726456 33736008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1480 4 825 Primary Pumps ATPases AT4G30110 58.688 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1480 K01534 - gmx:100817567 1612.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1480 3 33726456 33736008 Pvu3g1480 3 33726456 33736008 ECH